dbCAN Logo

PROTEIN: HRGMv2_0538_25_23

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0538_25_23.pdb
Genome ID:
HRGMv2_0538
Protein ID:
HRGMv2_0538_25_23

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MLMLVLAAGM   PLAAQTLGTE   YRLKEVIPVE   GRQGIAADSA   YYYVSGSTAL   YKYDKQGRLV 60
ARNDRPFDGL   PLAANHIGDI   DVWNGEIYAG   IETFDDGRGE   NIQVAVYDAN   TLKWKRSIDW 120
EPESGQVEVC   GLAVDRDSDM   VWMADWVDGR   YVYGYDRKTG   KYVRKVHLRP   VPQWQQGIFM 180
VDGRMLISAD   DGDADLDEPD   NLYVADLRDG   KSYATVLPLR   SMADFRRAGE   IEGLAVDPAT 240
DELLVLANRG   ARIVLGMPRG   FYPGYDGEVH   EVYVFEKVK 279
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q8ZKD2-F1-model_v4 16 279 55 298 0.6706 0.8059
AF-A0A1C1CLU0-F1-model_v4 18 279 44 271 0.6393 0.8132
AF-A0A0N4U624-F1-model_v4 13 279 1 316 0.5947 0.6797
AF-A0A0K0DZ69-F1-model_v4 21 278 46 323 0.588 0.6959
AF-A0A044TZQ5-F1-model_v4 25 278 16 294 0.5712 0.6713
AF-A4HYL2-F1-model_v4 20 279 16 367 0.5688 0.7398
AF-Q6AYI2-F1-model_v4 20 278 1 335 0.5595 0.7073
AF-Q8VEM9-F1-model_v4 20 278 1 335 0.5577 0.7048
AF-K7K771-F1-model_v4 17 279 6 271 0.5572 0.622
AF-Q9GZS3-F1-model_v4 20 279 4 305 0.555 0.6436
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A191TMP5-F1-model_v4 GH43_2 24 279 39 311 0.6414 0.7774
AF-A0A1P8PTT5-F1-model_v4 GH43_29 24 279 26 308 0.6332 0.7615
AF-A0A5B8CN25-F1-model_v4 GH43_29 24 279 26 308 0.633 0.763
AF-A0A7M2GL82-F1-model_v4 GH43_29 24 279 26 308 0.6328 0.7627
AF-A0A1P8Y8F9-F1-model_v4 GH183 19 279 29 346 0.627 0.7581
AF-A0A494WFT1-F1-model_v4 GH43_29 24 279 42 324 0.6245 0.7634
AF-A0A7G7SKW6-F1-model_v4 GH43_29 24 279 38 320 0.6224 0.761
AF-A0A7G7SYF7-F1-model_v4 GH43_29 24 279 38 320 0.6222 0.7608
AF-A0A0K1JG45-F1-model_v4 GH183 19 279 50 373 0.6162 0.7664
AF-A0A0K1JLN5-F1-model_v4 GH183 19 279 53 378 0.6159 0.7712
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UNY97481.1 GH117 16 279 42 369 0.6504 0.7982
A0A7X9THD4 GH43 25 279 20 282 0.6414 0.7507
A0A7D6XNF3 GH43_3 24 279 39 312 0.641 0.7767
A0A1H2H7A6 GH43 23 279 26 291 0.64 0.7548
A0A1L7FA03 GH43_29 20 279 42 322 0.6347 0.7598
A0A411X7M4 GH43_29 22 279 19 316 0.6235 0.749
A0A375AHS9 GH43_24 23 279 5 310 0.62 0.7535
UMB62098.1 GH43_24 24 279 27 326 0.6112 0.7499
A0A7H0HZ14 GH183 19 279 75 393 0.5981 0.759
A0A345XMJ4 GH183 18 279 82 404 0.5936 0.7581
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3nok-assembly2.cif.gz_B 18 279 4 230 0.7174 0.8177
6jbu-assembly1.cif.gz_A 10 279 1 258 0.6623 0.7226
5ftu-assembly1.cif.gz_D 13 279 1 258 0.6537 0.7146
3qee-assembly2.cif.gz_B 23 279 1 278 0.6535 0.7537
4rml-assembly1.cif.gz_A 11 279 1 251 0.6443 0.7119
6ou1-assembly1.cif.gz_A 14 279 1 258 0.6407 0.6973
5ex7-assembly1.cif.gz_A 20 278 4 274 0.6358 0.7004
6xg7-assembly1.cif.gz_A 17 274 2 288 0.6326 0.7133
4zlr-assembly1.cif.gz_A 20 278 5 273 0.6307 0.6988
2qe8-assembly1.cif.gz_A 22 279 1 332 0.6219 0.7505
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q0T8X4-F1-model_v4 17 279 40 285 0.6793 0.7925
AF-Q93XW5-F1-model_v4 21 279 5 324 0.5896 0.7013
AF-Q5JS37-F1-model_v4 17 279 44 339 0.5827 0.6982
AF-Q10281-F1-model_v4 19 278 2 314 0.5632 0.6599
AF-Q09278-F1-model_v4 25 278 16 297 0.5608 0.6709
AF-Q6AYI2-F1-model_v4 20 278 1 335 0.5595 0.7073
AF-Q58CV6-F1-model_v4 20 278 1 335 0.5588 0.7064
AF-Q8VEM9-F1-model_v4 20 278 1 335 0.5577 0.7048
AF-Q9BQ90-F1-model_v4 20 278 1 335 0.5576 0.7049
AF-Q9GZS3-F1-model_v4 20 279 4 305 0.555 0.6436
Download Full SwissProt Results