PROTEIN: HRGMv2_0467_38_17
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Protein File & Metadata
Source:
HRGMv2_0467_38_17.pdb
Genome ID:
Protein ID:
HRGMv2_0467_38_17
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Protein Sequence
MSILLLSILS MLSAFMQYVR NDYSVLDSQY AVFKGEHTGA ADEQGVRPNA DLSMVAAFMG 60 EDTMALKTLT YAVHTHKAVR KRCCLDGHYW GSVSVKDHQW ESSLWAMSVA YSAYFQWQQL 120 SDTLKNDIYQ LLKAECNYEL ERDIPTGYIG DTKAEENGWE VDVLAATLGL FPDDPLAPRW 180 FERMRAFAIN CYSHPSDARD TTVIDPDYDA IRVCDLYKGP NLYPDWTLQN HNFFHTSYQN 240 VVIQELGEAA LALRLFQGKN QRWSSRALLH NCDQVTRNVL NWLTLPDGEQ AMPNGNDWSL 300 FLYDQVTSYA TMACLRRDRD ALYFEQQCLR RIAQRQQTTA DGSFLLRPDV GARRMGVQAH 360 RLLMTELMHR LWPTDDLQPS SWSDFERRYQ GSKLFPCQQI VRTLTPSYFA CFSLSQGKRS 420 YTGYIAPIHN GQTDNLVIPF RQYNTGNVIG YYLSKTRKTN ARLMGDPKID LDGDYFTVKA 480 TLAENDSTMI RRFTLQSRKE GLEYSDEVRF LTKDSLKDYT GLLAISTDEF TGRNRHVDFL 540 PGCTRIDRLL TIRTDSRLKG TWTKETIDNS IRSRRIAPYV AGSPKRRHHI LYQVEE 596
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 596 | 16 | 599 | 0.6788 |
0.7292 |
| AF-U7PW17-F1-model_v4 | 1 | 596 | 11 | 705 | 0.6611 |
0.7395 |
| AF-Q59801-F1-model_v4 | 1 | 596 | 65 | 693 | 0.6066 |
0.7072 |
| AF-Q5RGL8-F1-model_v4 | 1 | 596 | 63 | 670 | 0.5569 |
0.6899 |
| AF-Q9UL01-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5374 |
0.6681 |
| AF-B5DF19-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5352 |
0.6653 |
| AF-Q8BLI4-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5323 |
0.6616 |
| AF-A0A2R8PYZ2-F1-model_v4 | 1 | 596 | 67 | 673 | 0.5174 |
0.692 |
| AF-Q8IZU8-F1-model_v4 | 1 | 596 | 80 | 687 | 0.5062 |
0.6804 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 596 | 2 | 587 | 0.7531 |
0.7775 |
| AF-C6XTA3-F1-model_v4 | PL37 | 1 | 595 | 25 | 634 | 0.7385 |
0.7761 |
| BCM88302.1 | PL37 | 2 | 596 | 6 | 592 | 0.7377 |
0.7657 |
| AF-A0A3B7MN57-F1-model_v4 | PL37 | 1 | 596 | 37 | 639 | 0.7349 |
0.7742 |
| AF-A0A2I7SK51-F1-model_v4 | PL37 | 1 | 596 | 35 | 638 | 0.7327 |
0.7717 |
| A0A7X9TCJ0 | PL37 | 1 | 596 | 38 | 642 | 0.7323 |
0.7733 |
| AF-A0A7D4Q3L2-F1-model_v4 | PL37 | 1 | 596 | 37 | 636 | 0.7317 |
0.7685 |
| AF-A0A1U7DSZ0-F1-model_v4 | PL37 | 1 | 596 | 34 | 638 | 0.7313 |
0.7704 |
| AF-A0A0P0GDG3-F1-model_v4 | PL37 | 1 | 595 | 26 | 632 | 0.7307 |
0.7677 |
| A0A413LPX4 | PL37 | 2 | 596 | 1 | 644 | 0.725 |
0.7675 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 596 | 2 | 587 | 0.7531 |
0.7775 |
| A0A7G8UMI7 | PL37 | 3 | 596 | 1 | 597 | 0.7508 |
0.7701 |
| C6XTA3 | PL37 | 1 | 595 | 25 | 634 | 0.7385 |
0.7761 |
| C6Y378 | PL37 | 1 | 596 | 26 | 628 | 0.7379 |
0.7707 |
| BCM88302.1 | PL37 | 2 | 596 | 6 | 592 | 0.7377 |
0.7657 |
| A0A3B7MN57 | PL37 | 1 | 596 | 37 | 639 | 0.7349 |
0.7742 |
| A0A7X9TCJ0 | PL37 | 1 | 596 | 38 | 642 | 0.7323 |
0.7733 |
| A0A415S2E7 | PL37 | 1 | 596 | 28 | 633 | 0.7302 |
0.7663 |
| A0A413LPX4 | PL37 | 2 | 596 | 1 | 644 | 0.725 |
0.7675 |
| A0A518HT83 | PL37 | 1 | 596 | 43 | 655 | 0.7215 |
0.7699 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1lxk-assembly1.cif.gz_A | 1 | 596 | 20 | 631 | 0.6546 |
0.7276 |
| 1ojo-assembly1.cif.gz_A | 1 | 596 | 21 | 632 | 0.653 |
0.727 |
| 1n7o-assembly1.cif.gz_A | 1 | 596 | 21 | 632 | 0.6525 |
0.7261 |
| 1n7p-assembly1.cif.gz_A | 1 | 596 | 21 | 632 | 0.6519 |
0.7254 |
| 1n7n-assembly1.cif.gz_A | 1 | 596 | 21 | 632 | 0.6514 |
0.725 |
| 1n7q-assembly1.cif.gz_A | 1 | 596 | 21 | 632 | 0.6507 |
0.7241 |
| 2brv-assembly1.cif.gz_X | 1 | 596 | 21 | 624 | 0.6502 |
0.7209 |
| 2wda-assembly1.cif.gz_A | 1 | 596 | 19 | 616 | 0.6492 |
0.7313 |
| 4fnv-assembly1.cif.gz_A | 5 | 596 | 52 | 620 | 0.6184 |
0.6918 |
| 6hzn-assembly1.cif.gz_A | 1 | 596 | 38 | 645 | 0.6088 |
0.6885 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 596 | 34 | 638 | 0.7336 |
0.7726 |
| AF-Q59289-F1-model_v4 | 4 | 596 | 84 | 621 | 0.6146 |
0.7223 |
| AF-Q59801-F1-model_v4 | 1 | 596 | 65 | 693 | 0.6066 |
0.7072 |
| AF-P0CZ00-F1-model_v4 | 1 | 596 | 56 | 663 | 0.5932 |
0.6933 |
| AF-Q9UL01-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5374 |
0.6681 |
| AF-P0C2H4-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5351 |
0.6649 |
| AF-Q8BLI4-F1-model_v4 | 1 | 596 | 58 | 691 | 0.5323 |
0.6616 |
| AF-Q8IZU8-F1-model_v4 | 1 | 596 | 80 | 687 | 0.5062 |
0.6804 |