PROTEIN: HRGMv2_0434_8_85
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Protein File & Metadata
Source:
HRGMv2_0434_8_85.pdb
Genome ID:
Protein ID:
HRGMv2_0434_8_85
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Protein Sequence
MSAPQNYPFA MPMYRDFVPQ GIRPWLYILV AFTFQLSGGV YLGSLNQMIG GMALMREDIL 60 MCMYSMLCGM SLYFPILFRM KFRFTNKTLL TTSAVVMLTC NIVAPHITCL PLLWAVCFIS 120 GMAKIQGTFE CMSNIQLWMT PERDFTVFFP YLHLLILGSM QISDLTTTYI MYNYHWTYMY 180 LLVDAVMLTV LLFLFVCTKH FRFMRPMPLY GVDWLGWALW AAFALQISYL FSYADWLDWW 240 NSPVFCQLAA MSIITLGFCL WRMLTIRHPY YEPKMWTYCH LAPVLILITL VEAFLATEYV 300 LEEVYYEEVM HYSEEVSVWL DWFAIVGIVC GCAFSYWWMH TCRRSYLRLC TIGIAALIGY 360 LFGFYYLMTT DIHISQLALP VACRGFAYAA LCCAFFVWLH EIMSFQHFFQ ALSVFNFLHA 420 VMGGVFGCAV YARCLAYLVP DNFARYSAAI DRVSFSRAPF NLGEYMEGFV SQMMEVSIKQ 480 IYGAVLYASV ILFLLFLLYD MPMRRHLRRI PLWSAVQRKV MGAYKNIRRG 530
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 1 | 511 | 1 | 505 | 0.8278 |
0.868 |
| AF-Q5F680-F1-model_v4 | 7 | 512 | 2 | 506 | 0.8148 |
0.853 |
| AF-P52600-F1-model_v4 | 10 | 510 | 7 | 511 | 0.8103 |
0.8599 |
| AF-Q9HZ88-F1-model_v4 | 24 | 510 | 1 | 493 | 0.8049 |
0.8639 |
| AF-Q8ZMK8-F1-model_v4 | 1 | 511 | 1 | 507 | 0.8044 |
0.8432 |
| AF-A0A0H3GU91-F1-model_v4 | 1 | 512 | 1 | 508 | 0.8043 |
0.8424 |
| AF-A0A133CZJ2-F1-model_v4 | 4 | 518 | 1 | 490 | 0.8015 |
0.8497 |
| AF-A0A0H3GNL5-F1-model_v4 | 2 | 507 | 6 | 520 | 0.8008 |
0.846 |
| AF-Q9I4A2-F1-model_v4 | 4 | 505 | 2 | 503 | 0.7992 |
0.8381 |
| AF-Q9I008-F1-model_v4 | 1 | 511 | 15 | 527 | 0.7979 |
0.843 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 6 | 508 | 9 | 535 | 0.7251 |
0.7982 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 6 | 525 | 16 | 481 | 0.664 |
0.742 |
| ARF89445.1 | GT1 | 1 | 506 | 65 | 953 | 0.647 |
0.8743 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 8 | 515 | 31 | 675 | 0.6035 |
0.8145 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 2 | 526 | 1 | 762 | 0.5668 |
0.6886 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 2 | 519 | 5 | 475 | 0.561 |
0.7505 |
| AF-A0A7H9AV10-F1-model_v4 | GH17 | 21 | 530 | 1 | 763 | 0.5573 |
0.6941 |
| AF-W8VNY0-F1-model_v4 | GH17 | 2 | 519 | 1 | 471 | 0.5568 |
0.7441 |
| AF-A0A1Y0M8J3-F1-model_v4 | GH17 | 2 | 519 | 3 | 473 | 0.5558 |
0.7435 |
| AF-A0A024FEX3-F1-model_v4 | GH17 | 5 | 529 | 7 | 628 | 0.5556 |
0.6754 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 6 | 508 | 9 | 535 | 0.7251 |
0.7982 |
| A2S189 | GH3 | 1 | 507 | 1 | 414 | 0.6561 |
0.7574 |
| ARF89445.1 | GT1 | 1 | 506 | 65 | 953 | 0.647 |
0.8743 |
| A0A387HHJ8 | GT1 | 8 | 515 | 31 | 675 | 0.6035 |
0.8145 |
| A0A3C1RID2 | GH17 | 1 | 530 | 1 | 735 | 0.5642 |
0.6817 |
| A0A7H8RF34 | CBM24 | 1 | 510 | 294 | 760 | 0.5457 |
0.7368 |
| A0A918L8E6 | GT2 | 9 | 511 | 1 | 440 | 0.5387 |
0.7247 |
| S5VEU6 | CE14 | 5 | 529 | 13 | 680 | 0.533 |
0.6553 |
| A0A9Q9RZ67 | GH78 | 7 | 512 | 748 | 1450 | 0.5306 |
0.8173 |
| A0A7H1AHD7 | GH43_1 | 3 | 518 | 7 | 496 | 0.5237 |
0.6903 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 8 | 504 | 1 | 483 | 0.7701 |
0.8237 |
| 8pnl-assembly2.cif.gz_C | 8 | 504 | 1 | 486 | 0.7629 |
0.8144 |
| 7y58-assembly1.cif.gz_A | 11 | 510 | 1 | 510 | 0.7592 |
0.8074 |
| 7d5p-assembly2.cif.gz_B | 23 | 503 | 1 | 413 | 0.7257 |
0.8305 |
| 7d5p-assembly1.cif.gz_A | 21 | 503 | 1 | 408 | 0.7251 |
0.8338 |
| 7d5q-assembly2.cif.gz_B | 23 | 503 | 1 | 411 | 0.7216 |
0.8275 |
| 7d5q-assembly1.cif.gz_A | 23 | 503 | 1 | 403 | 0.7182 |
0.8302 |
| 6kkl-assembly1.cif.gz_A | 18 | 506 | 1 | 372 | 0.7119 |
0.849 |
| 8b1j-assembly1.cif.gz_A | 9 | 507 | 1 | 451 | 0.7 |
0.7737 |
| 6kkk-assembly3.cif.gz_C | 16 | 507 | 1 | 381 | 0.6994 |
0.8272 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 7 | 511 | 2 | 506 | 0.8276 |
0.8641 |
| AF-P0DPR7-F1-model_v4 | 3 | 507 | 3 | 512 | 0.8219 |
0.8626 |
| AF-P0AEJ0-F1-model_v4 | 8 | 511 | 3 | 508 | 0.8117 |
0.8565 |
| AF-P52600-F1-model_v4 | 10 | 510 | 7 | 511 | 0.8103 |
0.8599 |
| AF-P44927-F1-model_v4 | 10 | 509 | 7 | 510 | 0.8077 |
0.8575 |
| AF-P32369-F1-model_v4 | 1 | 507 | 1 | 474 | 0.7998 |
0.8646 |
| AF-O35018-F1-model_v4 | 1 | 511 | 5 | 479 | 0.7903 |
0.8541 |
| AF-P94422-F1-model_v4 | 1 | 512 | 1 | 470 | 0.7899 |
0.8559 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 506 | 1 | 471 | 0.7869 |
0.8506 |
| AF-Q92EE1-F1-model_v4 | 1 | 506 | 1 | 471 | 0.784 |
0.8476 |