PROTEIN: HRGMv2_0429_5_88
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Protein File & Metadata
Source:
HRGMv2_0429_5_88.pdb
Genome ID:
Protein ID:
HRGMv2_0429_5_88
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Protein Sequence
MLQGPFRVPS FNGYIPRRLQ PWIYLLIAFC FLMSSGIYGG AMSQVMGEYS LMREDVLMII 60 MFNVVGVAMP FPFLFKMKFH FTNRQLLINA ALVVGICNFL IMWTDSVPLM CTLAYIAGFF 120 KLCGCFEIMS TIQLWMTPKR DFTIFFPLLY CLVLGNMFLS PWITEHLIYI YQDWRIINWA 180 MAGVMFFIAL FLYVTTHEFR FMKPLSFISL DVLGCLLWSA WMLEFIFFFN YGEHYNWLDS 240 KIMQGDLLLF IVTGYFCINR MLHIRHPYIE PAAWKYKRLI PLLILFAFVE FMGSTPKVLQ 300 TAFTGGVLHF GTFTTNVLNF VEWVGAVVGC LFCLFWCKVF HQKYTRLLTL GVATMAAYPV 360 MMYFLIDPGL PLEALYLPTF SRSFGNAIFF VMLTVYLEEL MPFQHFFMGL TMAGIVRNGP 420 MSTMCSGLYS FGIRHQMADN MARGLPYDAT QLLMISIKQL YGITCLIAIA VLIIFLLWDI 480 QPVRSTLKKM PAWNFVGKRM KKKKGFKK 508
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GPJ5-F1-model_v4 | 1 | 486 | 1 | 470 | 0.8012 |
0.8548 |
| AF-Q9I482-F1-model_v4 | 1 | 486 | 2 | 471 | 0.7987 |
0.8555 |
| AF-A0A0H3GUZ8-F1-model_v4 | 1 | 492 | 3 | 497 | 0.7967 |
0.8316 |
| AF-A0A133CZJ2-F1-model_v4 | 1 | 495 | 1 | 489 | 0.7935 |
0.8288 |
| AF-Q9I260-F1-model_v4 | 1 | 488 | 1 | 465 | 0.7914 |
0.85 |
| AF-Q2FW85-F1-model_v4 | 2 | 490 | 2 | 476 | 0.7886 |
0.8376 |
| AF-Q9HZ88-F1-model_v4 | 24 | 490 | 1 | 493 | 0.7866 |
0.8611 |
| AF-Q2G199-F1-model_v4 | 4 | 487 | 1 | 458 | 0.7837 |
0.8426 |
| AF-K0EWA3-F1-model_v4 | 3 | 487 | 5 | 469 | 0.7821 |
0.8413 |
| AF-P44903-F1-model_v4 | 4 | 489 | 1 | 461 | 0.7813 |
0.8407 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 1 | 487 | 8 | 534 | 0.7242 |
0.8056 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 2 | 505 | 16 | 481 | 0.6711 |
0.7371 |
| AF-A2S189-F1-model_v4 | GH3 | 1 | 487 | 4 | 413 | 0.6648 |
0.7603 |
| ARF89445.1 | GT1 | 1 | 486 | 262 | 953 | 0.6316 |
0.8643 |
| WBC00074.1 | CBM42 , GH2 | 1 | 489 | 3 | 493 | 0.6199 |
0.668 |
| A0A9W8R2E6 | GH88 | 1 | 496 | 38 | 503 | 0.6162 |
0.6909 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 4 | 495 | 30 | 675 | 0.6071 |
0.8232 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 1 | 508 | 1 | 758 | 0.5702 |
0.6983 |
| A0A3C1RID2 | GH17 | 3 | 508 | 7 | 735 | 0.5664 |
0.6978 |
| AF-A0A7H9AV10-F1-model_v4 | GH17 | 6 | 508 | 1 | 763 | 0.5643 |
0.6965 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 1 | 487 | 8 | 534 | 0.7242 |
0.8056 |
| A2S189 | GH3 | 1 | 487 | 4 | 413 | 0.6648 |
0.7603 |
| ARF89445.1 | GT1 | 1 | 486 | 262 | 953 | 0.6316 |
0.8643 |
| WBC00074.1 | CBM42 , GH2 | 1 | 489 | 3 | 493 | 0.6199 |
0.668 |
| A0A9W8R2E6 | GH88 | 1 | 496 | 38 | 503 | 0.6162 |
0.6909 |
| A0A387HHJ8 | GT1 | 4 | 495 | 30 | 675 | 0.6071 |
0.8232 |
| A0A3C1RID2 | GH17 | 3 | 508 | 7 | 735 | 0.5664 |
0.6978 |
| A0A7H8RF34 | CBM24 | 4 | 490 | 124 | 760 | 0.5524 |
0.7029 |
| A0A918L8E6 | GT2 | 6 | 489 | 1 | 440 | 0.5475 |
0.7203 |
| A0A9Q9RZ67 | GH78 | 1 | 492 | 740 | 1450 | 0.5376 |
0.8266 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 6 | 484 | 1 | 483 | 0.7567 |
0.8018 |
| 7y58-assembly1.cif.gz_A | 8 | 490 | 1 | 510 | 0.7504 |
0.8091 |
| 8pnl-assembly2.cif.gz_C | 6 | 484 | 1 | 486 | 0.7489 |
0.7963 |
| 7d5p-assembly1.cif.gz_A | 6 | 482 | 1 | 408 | 0.7316 |
0.8281 |
| 7d5p-assembly2.cif.gz_B | 20 | 482 | 1 | 413 | 0.7312 |
0.8239 |
| 7d5q-assembly2.cif.gz_B | 20 | 482 | 1 | 411 | 0.7273 |
0.8213 |
| 7d5q-assembly1.cif.gz_A | 20 | 482 | 1 | 403 | 0.7239 |
0.8239 |
| 6kkl-assembly1.cif.gz_A | 15 | 485 | 1 | 372 | 0.7202 |
0.8453 |
| 8ex5-assembly1.cif.gz_A | 6 | 499 | 1 | 414 | 0.7147 |
0.8041 |
| 6oom-assembly2.cif.gz_A-2 | 11 | 481 | 1 | 392 | 0.7134 |
0.8212 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P32369-F1-model_v4 | 1 | 488 | 3 | 474 | 0.8075 |
0.8607 |
| AF-Q9RQ29-F1-model_v4 | 2 | 491 | 2 | 506 | 0.8062 |
0.8495 |
| AF-P0DPR7-F1-model_v4 | 2 | 485 | 4 | 512 | 0.8017 |
0.8586 |
| AF-P94422-F1-model_v4 | 1 | 492 | 4 | 471 | 0.7996 |
0.8542 |
| AF-P0AEJ1-F1-model_v4 | 1 | 490 | 1 | 507 | 0.7969 |
0.8468 |
| AF-P52600-F1-model_v4 | 7 | 490 | 7 | 511 | 0.7923 |
0.8523 |
| AF-O35018-F1-model_v4 | 1 | 491 | 7 | 479 | 0.7882 |
0.8402 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 486 | 4 | 471 | 0.7849 |
0.84 |
| AF-P94574-F1-model_v4 | 7 | 486 | 1 | 452 | 0.7834 |
0.8471 |
| AF-P23054-F1-model_v4 | 4 | 486 | 4 | 458 | 0.7833 |
0.8473 |