PROTEIN: HRGMv2_0429_3_116
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Protein File & Metadata
Source:
HRGMv2_0429_3_116.pdb
Genome ID:
Protein ID:
HRGMv2_0429_3_116
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Protein Sequence
MSLIEIKKVE NKKDLKTFID FHYDLYEGNE YDVPNLFSDD MNTLSKDRNA AFDFCEAEYY 60 LAYKDGKVAG RVAAIINHKA NNKWGRKSVR FGWIDFIDDR EVSQALMQAV EDYGKAKGME 120 DVVGPLGFTD MDPEGMLTWG FDQLGTMPTI YNYPYYPEHI EALEGYEVDN KYVEFKMMVP 180 ETVPEKYTKI AAMIEKRYNL HVRKITKKEV FQGGLGQRIF ELINDTYKDL YGYSELSQNQ 240 ITQLIKSYLS FLDFNLITLV EDWTEPEHKL VGVGITMPSL AHALQKCRRG RLFPFGWWHV 300 LKAIKFHKTN IVDLLLIGIL PEYRAKGANA ILFADLIPRY QAYGFEWGET QVELETNAGV 360 QGQWGALNPV MHKRRNCYKK IIK 383
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8988 |
0.9356 |
| AF-X8EWX4-F1-model_v4 | 1 | 382 | 17 | 393 | 0.8983 |
0.9359 |
| AF-P9WJM7-F1-model_v4 | 3 | 383 | 1 | 313 | 0.7247 |
0.8176 |
| AF-Q9CBC9-F1-model_v4 | 4 | 383 | 1 | 309 | 0.7128 |
0.8099 |
| AF-K0EMI4-F1-model_v4 | 1 | 383 | 11 | 315 | 0.7029 |
0.8163 |
| AF-Q54DW0-F1-model_v4 | 3 | 383 | 1 | 321 | 0.6596 |
0.7402 |
| AF-K0EYT8-F1-model_v4 | 1 | 381 | 10 | 259 | 0.6304 |
0.7918 |
| AF-A0A1D8PMF7-F1-model_v4 | 1 | 383 | 8 | 390 | 0.6073 |
0.6518 |
| AF-K0EUT6-F1-model_v4 | 1 | 383 | 14 | 316 | 0.6057 |
0.7114 |
| AF-Q9NAR1-F1-model_v4 | 1 | 381 | 26 | 332 | 0.6055 |
0.7364 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 382 | 15 | 339 | 0.7515 |
0.8466 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 383 | 410 | 740 | 0.4948 |
0.7475 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 383 | 583 | 968 | 0.4817 |
0.6957 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 383 | 583 | 956 | 0.4798 |
0.705 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4796 |
0.7715 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 383 | 72 | 834 | 0.4771 |
0.6589 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 383 | 606 | 980 | 0.4769 |
0.7032 |
| UPL03096.1 | GH3 | 1 | 383 | 249 | 968 | 0.4765 |
0.6874 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 382 | 530 | 859 | 0.4753 |
0.7553 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 382 | 104 | 859 | 0.475 |
0.6631 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 382 | 15 | 339 | 0.7515 |
0.8466 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4796 |
0.7715 |
| A0A7U2MF49 | GH3 | 1 | 383 | 72 | 834 | 0.4771 |
0.6589 |
| UPL03096.1 | GH3 | 1 | 383 | 249 | 968 | 0.4765 |
0.6874 |
| V9M3A9 | GH3 | 1 | 380 | 536 | 858 | 0.4655 |
0.7512 |
| Q6MFP1 | GH3 | 1 | 383 | 582 | 1082 | 0.4635 |
0.6887 |
| A0A7H8QUW2 | GH3 | 1 | 383 | 209 | 947 | 0.4626 |
0.6633 |
| A0A161HFD8 | GH3 | 1 | 383 | 570 | 968 | 0.4614 |
0.6655 |
| E5A892 | GH3 | 1 | 383 | 540 | 881 | 0.4587 |
0.7093 |
| G1XST4 | GH3 | 1 | 383 | 606 | 1002 | 0.4573 |
0.6657 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5kgh-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.7282 |
0.8169 |
| 7q3a-assembly1.cif.gz_A | 1 | 383 | 18 | 339 | 0.7275 |
0.8286 |
| 7q3a-assembly2.cif.gz_B | 1 | 383 | 17 | 340 | 0.7258 |
0.8237 |
| 5kf2-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.7251 |
0.8149 |
| 2c27-assembly1.cif.gz_A | 7 | 381 | 1 | 301 | 0.7247 |
0.8286 |
| 5kgh-assembly1.cif.gz_B | 4 | 383 | 1 | 313 | 0.7234 |
0.8149 |
| 5kga-assembly1.cif.gz_B | 4 | 383 | 1 | 316 | 0.7208 |
0.8097 |
| 5kf1-assembly1.cif.gz_B | 4 | 383 | 1 | 312 | 0.7207 |
0.8131 |
| 1p0h-assembly1.cif.gz_A | 4 | 380 | 1 | 290 | 0.7054 |
0.8213 |
| 2wpw-assembly4.cif.gz_D | 3 | 383 | 1 | 322 | 0.6817 |
0.7651 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8988 |
0.9356 |
| AF-D3Q4A8-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7614 |
0.8626 |
| AF-Q5EDG0-F1-model_v4 | 3 | 380 | 1 | 301 | 0.7485 |
0.8547 |
| AF-C6WPR7-F1-model_v4 | 3 | 380 | 1 | 297 | 0.7455 |
0.8566 |
| AF-B0RAV5-F1-model_v4 | 1 | 381 | 9 | 304 | 0.7453 |
0.8672 |
| AF-C7QKH8-F1-model_v4 | 1 | 380 | 1 | 314 | 0.7447 |
0.8362 |
| AF-D1A4F4-F1-model_v4 | 1 | 383 | 1 | 297 | 0.7441 |
0.8544 |
| AF-A5CTZ8-F1-model_v4 | 1 | 381 | 11 | 306 | 0.7433 |
0.8677 |
| AF-C7MRC4-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7424 |
0.8417 |
| AF-B8HD44-F1-model_v4 | 1 | 383 | 4 | 322 | 0.7422 |
0.8312 |