PROTEIN: HRGMv2_0429_2_130
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Protein File & Metadata
Source:
HRGMv2_0429_2_130.pdb
Genome ID:
Protein ID:
HRGMv2_0429_2_130
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Detailed structural information will appear here after analysis...
Protein Sequence
MNRYKNSIVR LLCLCGFLFG HSEMDAQNGN LPQAIEPYFS ASTKQPMPPH TAGFIQRWLL 60 LEPISMPIKS NVVFTDSYLR EKFSAQYFPK QLEVIPKDGA TVRVGKEKLR WHALDSKLYN 120 VKLFRFATSL DKPKYGVLFW AVTIIDCPEK IPNVRLAVGS NGASMWWLNG EEAVMLEGDR 180 RMVKDDVVSP KLTLRKGRNI LRGAVINGPG MSDFCLRFID EQGNPVRNLS INVK 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4A750-F1-model_v4 | 43 | 234 | 116 | 284 | 0.3227 |
0.7125 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5629 |
0.9825 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 32 | 234 | 382 | 700 | 0.5594 |
0.969 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 32 | 234 | 482 | 697 | 0.5522 |
0.9559 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5046 |
0.9551 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 16 | 234 | 11 | 214 | 0.4784 |
0.8413 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 22 | 224 | 15 | 202 | 0.429 |
0.8334 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 25 | 234 | 62 | 277 | 0.4263 |
0.802 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 14 | 234 | 355 | 837 | 0.4229 |
0.7039 |
| A0A380YJ87 | GH20 | 12 | 234 | 355 | 837 | 0.4221 |
0.6971 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 48 | 223 | 458 | 622 | 0.4216 |
0.8571 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5629 |
0.9825 |
| D7SFH3 | GH43_2 | 32 | 234 | 482 | 697 | 0.5522 |
0.9559 |
| A0A7G9XVI1 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5046 |
0.9551 |
| A0A344TID5 | GH163 | 22 | 224 | 15 | 202 | 0.429 |
0.8334 |
| A0A380YJ87 | GH20 | 12 | 234 | 355 | 837 | 0.4221 |
0.6971 |
| A0A402CZV5 | GH4 | 48 | 223 | 458 | 622 | 0.4216 |
0.8571 |
| A0A4V0I0Q3 | CBM51 , CBM67 | 1 | 234 | 43 | 770 | 0.404 |
0.6271 |
| BCM93550.1 | GH2 | 42 | 234 | 948 | 1134 | 0.3976 |
0.822 |
| A0A921M789 | GH2 | 17 | 234 | 718 | 1112 | 0.3967 |
0.7082 |
| A0A518LMX6 | GH31 | 45 | 234 | 945 | 1147 | 0.3963 |
0.8108 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.