PROTEIN: HRGMv2_0426_22_4
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Protein File & Metadata
Source:
HRGMv2_0426_22_4.pdb
Genome ID:
Protein ID:
HRGMv2_0426_22_4
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Protein Sequence
MADWHAPQGP FDIPDVPDYI PRRLKPWLFI FFVLIIQFSG GVYLAAASDM VGTTALMQED 60 ILMIGYASLI GMSINFAVMF RFKFRFSNRT QLLSAAIVLI VANIVCACST SVPLMVAVCF 120 VAGWFRMQAT LACNSTIQLW LTPVRDMSVF FCYVYLVVDS VIQLSGIATI YTAFYTQWEY 180 MQWIMVGLLA FMMLAVMIMV RPVRGPMFIP LLGIDWIGSI LWAGFMMCFT FICVYGNFYD 240 WWDALEIRLA ALLGLASLAI NLWRASFLHH PYISFRAMTN RNVVRATAVY LVFFTLIATE 300 HVFEHSYAAT ALGFDETNLI DLNWYVFAGI LAGCAFTYVT FALRKWRYKT MTAIGFTLAA 360 VYLAYFYFVI DYNVEKEMLF VPLFFRGAAS VIISIVFLTS IVQSGLPFQV FPQALTINGF 420 TGAVMGATFG PAVVGEWLRH TLAKNASLLG SVATDFNPDT AHMPLGQLLG IVQTHALVVS 480 MKEIYGWLLI VALTSILIIL VSYSPLRPWA IFPKWKTIRR TLRRMVRTEE RARNFA 536
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GSP9-F1-model_v4 | 2 | 523 | 11 | 547 | 0.8225 |
0.8686 |
| AF-Q32DH7-F1-model_v4 | 1 | 505 | 3 | 504 | 0.8196 |
0.8685 |
| AF-P0AEJ0-F1-model_v4 | 2 | 505 | 1 | 500 | 0.8023 |
0.8568 |
| AF-P44927-F1-model_v4 | 1 | 505 | 2 | 504 | 0.8005 |
0.8493 |
| AF-P52600-F1-model_v4 | 2 | 504 | 4 | 504 | 0.7983 |
0.8516 |
| AF-Q8ZMK8-F1-model_v4 | 1 | 503 | 1 | 498 | 0.7932 |
0.849 |
| AF-A0A0H3GU91-F1-model_v4 | 1 | 503 | 1 | 498 | 0.7929 |
0.8489 |
| AF-Q9I4A2-F1-model_v4 | 7 | 505 | 3 | 502 | 0.7907 |
0.838 |
| AF-Q9HZ88-F1-model_v4 | 29 | 504 | 1 | 485 | 0.7885 |
0.8685 |
| AF-A0A0H3GPJ5-F1-model_v4 | 2 | 507 | 1 | 467 | 0.7877 |
0.8618 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 6 | 521 | 7 | 542 | 0.7188 |
0.778 |
| AF-A2S189-F1-model_v4 | GH3 | 1 | 505 | 1 | 408 | 0.6453 |
0.7571 |
| ARF89445.1 | GT1 | 1 | 504 | 261 | 949 | 0.6421 |
0.8766 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 505 | 16 | 462 | 0.6331 |
0.7375 |
| A0A9W8R2E6 | GH88 | 1 | 533 | 31 | 486 | 0.6103 |
0.7124 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 10 | 504 | 30 | 516 | 0.5889 |
0.8315 |
| A0A918L8E6 | GT2 | 11 | 536 | 1 | 654 | 0.5555 |
0.6401 |
| AF-A0A1J0LIF2-F1-model_v4 | GH17 | 7 | 503 | 7 | 455 | 0.5392 |
0.7576 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 507 | 54 | 822 | 0.5371 |
0.6934 |
| AF-A0A7L5FXW1-F1-model_v4 | GH17 | 6 | 536 | 1 | 629 | 0.536 |
0.6478 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 6 | 521 | 7 | 542 | 0.7188 |
0.778 |
| A2S189 | GH3 | 1 | 505 | 1 | 408 | 0.6453 |
0.7571 |
| ARF89445.1 | GT1 | 1 | 504 | 261 | 949 | 0.6421 |
0.8766 |
| A0A9W8R2E6 | GH88 | 1 | 533 | 31 | 486 | 0.6103 |
0.7124 |
| A0A387HHJ8 | GT1 | 10 | 504 | 30 | 516 | 0.5889 |
0.8315 |
| A0A918L8E6 | GT2 | 11 | 536 | 1 | 654 | 0.5555 |
0.6401 |
| A0A3C1RID2 | GH17 | 7 | 536 | 6 | 606 | 0.5447 |
0.6616 |
| A0A7H8RF34 | CBM24 | 1 | 506 | 293 | 748 | 0.5345 |
0.7414 |
| A0A9Q9RZ67 | GH78 | 1 | 536 | 736 | 1468 | 0.5241 |
0.7712 |
| A0A8H8MAC7 | CE16 | 6 | 536 | 54 | 736 | 0.5195 |
0.62 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 10 | 503 | 1 | 481 | 0.7657 |
0.8256 |
| 8pnl-assembly2.cif.gz_C | 10 | 503 | 1 | 484 | 0.7585 |
0.8161 |
| 7y58-assembly1.cif.gz_A | 3 | 505 | 5 | 502 | 0.7488 |
0.8031 |
| 7d5p-assembly2.cif.gz_B | 25 | 505 | 1 | 413 | 0.7205 |
0.8283 |
| 7d5p-assembly1.cif.gz_A | 23 | 505 | 1 | 408 | 0.7197 |
0.8311 |
| 7d5q-assembly2.cif.gz_B | 25 | 505 | 1 | 411 | 0.7165 |
0.8255 |
| 7d5q-assembly1.cif.gz_A | 25 | 505 | 1 | 403 | 0.7122 |
0.827 |
| 6kkl-assembly1.cif.gz_A | 20 | 507 | 1 | 370 | 0.698 |
0.8407 |
| 6oom-assembly2.cif.gz_A-2 | 16 | 504 | 1 | 392 | 0.6895 |
0.8118 |
| 8b1j-assembly1.cif.gz_A | 21 | 507 | 1 | 447 | 0.6886 |
0.7712 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9RQ29-F1-model_v4 | 2 | 505 | 1 | 498 | 0.8164 |
0.8674 |
| AF-P0DPR7-F1-model_v4 | 7 | 505 | 4 | 509 | 0.8134 |
0.8672 |
| AF-P0AEJ1-F1-model_v4 | 2 | 505 | 1 | 500 | 0.8035 |
0.8578 |
| AF-P0AEJ0-F1-model_v4 | 2 | 505 | 1 | 500 | 0.8023 |
0.8568 |
| AF-P44927-F1-model_v4 | 1 | 505 | 2 | 504 | 0.8005 |
0.8493 |
| AF-P52600-F1-model_v4 | 2 | 504 | 4 | 504 | 0.7983 |
0.8516 |
| AF-Q8Y9K8-F1-model_v4 | 1 | 503 | 2 | 467 | 0.7857 |
0.8606 |
| AF-Q92EE1-F1-model_v4 | 1 | 503 | 2 | 467 | 0.7836 |
0.8585 |
| AF-P94422-F1-model_v4 | 1 | 504 | 4 | 460 | 0.7795 |
0.8695 |
| AF-P54585-F1-model_v4 | 1 | 533 | 2 | 529 | 0.7708 |
0.7968 |