PROTEIN: HRGMv2_0402_42_13
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Protein File & Metadata
Source:
HRGMv2_0402_42_13.pdb
Genome ID:
Protein ID:
HRGMv2_0402_42_13
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Protein Sequence
MKIIQVLLTL VFTSFFFFPF YFTFLPTVNT KMMMAALGGF LLLVKLARSG SAQIDKGIFS 60 VSLWAILVSL ASLISMVLNN TPDDSYLGYV VSMWVWLAAA YFVVSAIKFT HGSVTIERVC 120 VYLITVGVLQ CFLAIAVDTI PVVKTFIDSI LAGEGFMGKN ETRLYGLGCA LDVAGTRFSA 180 LLVMIAFLLP KAAQKEKSGL YMTLLLVAFC VLVGIGSIIG RTTVVGAVLA LLYMFYTFLF 240 KNNIPDDIRK KLMRWVVGGM FVGIVVAVGL YNFSPQWQKY FQFGFEGFFS LAETGRWEVH 300 SNSQLAAQFL LPDNAWTWII GDGYIASTTI DPYYIGKAWT GFYKGTDVGY SRFLFYFGLI 360 GLVIFSLFFV KVCQVCANRI KEYKYMFVIF LLINFIVWFK VSTDIFVVFA PFLCLSALKD 420 EDGQELVKQ 429
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8F0V5-F1-model_v4 | 5 | 429 | 43 | 469 | 0.6526 |
0.7161 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A517MXC4-F1-model_v4 | GT26 | 8 | 423 | 27 | 447 | 0.5172 |
0.6827 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q4JZZ9 | GT4 | 1 | 423 | 2 | 407 | 0.6587 |
0.7045 |
| A0A517MXC4 | GT26 | 8 | 423 | 27 | 447 | 0.5172 |
0.6827 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44067-F1-model_v4 | 5 | 417 | 11 | 399 | 0.6788 |
0.7415 |
| AF-P37784-F1-model_v4 | 6 | 429 | 6 | 380 | 0.6389 |
0.7097 |