PROTEIN: HRGMv2_0402_12_4
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Protein File & Metadata
Source:
HRGMv2_0402_12_4.pdb
Genome ID:
Protein ID:
HRGMv2_0402_12_4
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Protein Sequence
MEQNVISVSY GAKYKNYPFY NWMPKPLGII LLILLFIPIL TVGGVYTANS GEMTSGLGIQ 60 SEHIQFVGFV TSIGMAAFSP FFYQLVCIRR EKMMCVVGFS IMYLLSYVCA ITDSIFVLAL 120 CSLVMGFLRM VLMMVNLFTL IRYAFGMEAT RNITPGNEPD DEQGWDRLDS EKSKSMPMIY 180 LFFMILGQLG TSLTAWLAYE YQWQDVYYYM MGMTLVAILI VLVTMPYHAY NGRRFPITFR 240 KFGNVAVFSS MMTCGIYVLV YGKTLDWFAD PTIVRSTILT VVFAAVFFYM EWSHRSPYFL 300 MEVFRLRTIN MGIVLFILLM VFNTSSMFVN VFTGVGMEID NWQNAALGNW SMLGYFIGAV 360 IAIILGSRNV KLKYLFGLGF MLIGVSALFM YFEVQTAGLY ERMKYPVIIR STGMMLIYSL 420 TAVYANQRMP YKYLSTWICI MLSVRMVIGP GIGSALYSNV LQHRQQHYVT MFAQDIDRTD 480 TQSASSYDQT LQGMRWQGRS ETEAENMAAM SVKGKVQVQA TLSAVKEMSG WTFYGCIISM 540 LFVLIYPYKK RKLSAWRD 558
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 7 | 556 | 1 | 504 | 0.8291 |
0.8901 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 553 | 2 | 520 | 0.8193 |
0.867 |
| AF-P0AEJ0-F1-model_v4 | 9 | 554 | 1 | 507 | 0.8179 |
0.8767 |
| AF-P52600-F1-model_v4 | 4 | 553 | 1 | 508 | 0.8151 |
0.8727 |
| AF-P44927-F1-model_v4 | 3 | 553 | 1 | 508 | 0.812 |
0.8685 |
| AF-Q32DH7-F1-model_v4 | 4 | 552 | 1 | 507 | 0.8067 |
0.8654 |
| AF-Q5F680-F1-model_v4 | 8 | 553 | 1 | 502 | 0.7995 |
0.8614 |
| AF-A0A0H3GSP9-F1-model_v4 | 5 | 552 | 11 | 538 | 0.7862 |
0.8398 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 557 | 1 | 509 | 0.782 |
0.8366 |
| AF-Q9I008-F1-model_v4 | 1 | 553 | 10 | 523 | 0.7809 |
0.8422 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 11 | 558 | 9 | 541 | 0.7291 |
0.7781 |
| ARF89445.1 | GT1 | 4 | 552 | 65 | 952 | 0.6319 |
0.8153 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 13 | 558 | 19 | 473 | 0.6209 |
0.7241 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 14 | 558 | 31 | 541 | 0.5841 |
0.807 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 558 | 294 | 768 | 0.5309 |
0.7241 |
| A0A9Q9RZ67 | GH78 | 3 | 558 | 732 | 1461 | 0.5138 |
0.7508 |
| F9G000 | GH3 | 1 | 557 | 39 | 562 | 0.4964 |
0.7594 |
| AF-A0A7H8QT70-F1-model_v4 | GH27 | 4 | 558 | 38 | 757 | 0.496 |
0.6497 |
| AF-S5VEU6-F1-model_v4 | CE14 | 15 | 558 | 20 | 788 | 0.4944 |
0.605 |
| A0A9Q8T2G0 | CE1 | 1 | 558 | 383 | 881 | 0.4786 |
0.6543 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 11 | 558 | 9 | 541 | 0.7291 |
0.7781 |
| ARF89445.1 | GT1 | 4 | 552 | 65 | 952 | 0.6319 |
0.8153 |
| A0A387HHJ8 | GT1 | 14 | 558 | 31 | 541 | 0.5841 |
0.807 |
| A0A7H8RF34 | CBM24 | 1 | 558 | 294 | 768 | 0.5309 |
0.7241 |
| A0A9Q9RZ67 | GH78 | 3 | 558 | 732 | 1461 | 0.5138 |
0.7508 |
| A0A918L8E6 | GT2 | 24 | 558 | 2 | 483 | 0.5121 |
0.6509 |
| F9G000 | GH3 | 1 | 557 | 39 | 562 | 0.4964 |
0.7594 |
| A0A7H8QT70 | GH27 | 4 | 558 | 38 | 757 | 0.496 |
0.6497 |
| S5VEU6 | CE14 | 15 | 558 | 20 | 788 | 0.4944 |
0.605 |
| A0A9Q8T2G0 | CE1 | 1 | 558 | 383 | 881 | 0.4786 |
0.6543 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 13 | 550 | 1 | 483 | 0.7356 |
0.8057 |
| 7y58-assembly1.cif.gz_A | 8 | 556 | 4 | 509 | 0.7297 |
0.7863 |
| 8pnl-assembly2.cif.gz_C | 11 | 550 | 1 | 486 | 0.724 |
0.7916 |
| 7d5p-assembly1.cif.gz_A | 25 | 550 | 1 | 408 | 0.6997 |
0.8216 |
| 7d5p-assembly2.cif.gz_B | 25 | 550 | 1 | 413 | 0.6968 |
0.8146 |
| 7d5q-assembly1.cif.gz_A | 25 | 550 | 1 | 403 | 0.6945 |
0.8198 |
| 7d5q-assembly2.cif.gz_B | 25 | 550 | 1 | 411 | 0.6941 |
0.8131 |
| 6gs7-assembly1.cif.gz_A | 24 | 553 | 2 | 471 | 0.6711 |
0.7458 |
| 6gs4-assembly1.cif.gz_A | 24 | 554 | 2 | 468 | 0.6703 |
0.7475 |
| 4zow-assembly1.cif.gz_A | 13 | 549 | 1 | 391 | 0.6688 |
0.8009 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ1-F1-model_v4 | 8 | 556 | 1 | 508 | 0.8205 |
0.8776 |
| AF-P0AEJ0-F1-model_v4 | 9 | 554 | 1 | 507 | 0.8179 |
0.8767 |
| AF-P52600-F1-model_v4 | 4 | 553 | 1 | 508 | 0.8151 |
0.8727 |
| AF-P44927-F1-model_v4 | 3 | 553 | 1 | 508 | 0.812 |
0.8685 |
| AF-Q9RQ29-F1-model_v4 | 8 | 553 | 1 | 502 | 0.8049 |
0.8668 |
| AF-P0DPR7-F1-model_v4 | 9 | 552 | 8 | 512 | 0.7953 |
0.8567 |
| AF-P37594-F1-model_v4 | 15 | 553 | 1 | 495 | 0.7683 |
0.8303 |
| AF-D0ZXQ3-F1-model_v4 | 15 | 554 | 1 | 495 | 0.7642 |
0.8263 |
| AF-P94574-F1-model_v4 | 15 | 553 | 1 | 452 | 0.7625 |
0.8569 |
| AF-P9WJW9-F1-model_v4 | 15 | 553 | 1 | 508 | 0.7598 |
0.8124 |