PROTEIN: HRGMv2_0398_2_29
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Protein File & Metadata
Source:
HRGMv2_0398_2_29.pdb
Genome ID:
Protein ID:
HRGMv2_0398_2_29
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Protein Sequence
MNRIKLDNID WVKMGGNILF SLLVFIIMVD PTNSVLHLKD ILFILLVGYN ILFFKPDFSL 60 LPLILGVYIA LMLSLIFSEM QATHIDMVFF IGMLKAYAPL ILLLWVRHYD ILKLSIAPAA 120 LMGVIITIIY IAVASSELIE FFVYKFVSAH NDMIKMSERH FLGFKIYGMY YKSMVTLLLP 180 YAWCTYHLLY GNRRHRLGLA LICVLLTFAF FTSGTRSTML VPLALVGVLL FSNMNHYPRA 240 RYFIYPVAAF FCVFFLLILT LLASDKGESS NFVKYGHLTS FADLFTAHPE YLLWGQGIGT 300 NFYSIGFHRM TNQTEWTYLE LLRGHGIFII CFLILLLYPV RTFWQHRKDS MTFTLTACYF 360 MFLLIAGTNP LLSSSTGMII IVTAYSIAYR LRAKNVTMNT LPQ 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9HUG6-F1-model_v4 | 4 | 402 | 9 | 398 | 0.7026 |
0.7488 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D2IX70-F1-model_v4 | GT1 | 34 | 397 | 118 | 501 | 0.6014 |
0.7464 |
| AF-A0A517MXC4-F1-model_v4 | GT26 | 8 | 403 | 17 | 455 | 0.5917 |
0.7885 |
| AF-D5MJ04-F1-model_v4 | GT9 | 1 | 403 | 12 | 422 | 0.5611 |
0.7435 |
| AF-K0J022-F1-model_v4 | GT4 | 6 | 403 | 1 | 760 | 0.5561 |
0.7406 |
Structural Homologs -
CAZyme-ID50
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 12 | 403 | 1 | 382 | 0.7648 |
0.8065 |
| AF-Q9HUG6-F1-model_v4 | 4 | 402 | 9 | 398 | 0.7026 |
0.7488 |
| AF-Q6FFS6-F1-model_v4 | 1 | 396 | 9 | 425 | 0.6166 |
0.7435 |