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PROTEIN: HRGMv2_0398_11_13

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_0398_11_13.pdb
Genome ID:
HRGMv2_0398
Protein ID:
HRGMv2_0398_11_13

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRTSLTLLHL   LLLGVFVSPN   QVFAQMPEQG   ELTWEEFVES   YEATFRSEDE   ADEVNMDELL 60
LLEQLVQHPM   QLNRLTREDL   LLLPFLAEQQ   VDSILDYRKR   KYGFRSMGEL   QLVSGIDFFA 120
RQALSLFVRC   DSAWVLPPRS   YGKQAPIALK   EHFKRASHEW   ETRIDLPLYR   RQGDRIPDKP 180
TPTNYYTGAP   FRHLLRYRYH   YKRALVYGVT   LETDPGEPLA   RRGFYPYDYL   SAYAYFRPVG 240
RNWAWVVGDY   ELQHGEGLVF   GKQFFANREG   SYHSGRRADF   RFRPHTGTDE   SRFFRGGAGA 300
YQWKKLHLAA   FVSYQKKDAR   LSETRPVVET   LYQSGLHRTQ   SEISHRRTLG   ELCVGGSVGW 360
KEKHWGLETA   GAFTSFEYFI   YPKLNRYNRS   YFRGKYAGNV   SVAHYLKWGR   SNWQGEIATN 420
HLGRIATLQS   LSIRLSTALQ   LGAQLRYFSP   DYFCFYGDAL   QQGSRVSNEQ   GFLFSSRWLP 480
LRHWELTGYV   DFFRFPQPTF   LTILSGAKGM   ELSLQSKWKL   SRSWQLGLRY   RMKTRQRTVS 540
GQELMEYRQV   HRLRCFASRS   QRQYDVHLQA   DATFATRQTQ   PLTLGWMFSS   RASWRPSASF 600
QLKGFAGLFF   TDNFESAVYA   YEPQLLHASS   FPSYFYHGAR   AVLITQWQPL   SRLWLALRFS 660
TLRYFNRDTI   SSGIAEISSP   WKNDLSLQLR   YTLPGK 696
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I2I2-F1-model_v4 22 694 27 653 0.5171 0.5658
AF-P37409-F1-model_v4 25 694 13 614 0.5097 0.5631
AF-Q32AE6-F1-model_v4 25 694 13 614 0.5054 0.5582
AF-Q0PAD4-F1-model_v4 23 696 18 696 0.5026 0.5318
AF-Q8ZMN0-F1-model_v4 23 693 20 726 0.4851 0.5252
AF-P77802-F1-model_v4 99 696 97 739 0.4238 0.5381
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-V5WID3-F1-model_v4 CBM48 25 692 36 663 0.5666 0.6222
AF-F4LQA3-F1-model_v4 CBM48 25 692 27 687 0.5611 0.5982
AF-F8EWY1-F1-model_v4 CBM48 25 692 27 697 0.5565 0.5914
AF-A0A5C1Q9F1-F1-model_v4 CBM48 70 692 35 655 0.554 0.6096
ULQ60875.1 CBM48 71 692 33 753 0.5456 0.6388
AF-A0A5C1QAA2-F1-model_v4 CBM48 131 692 122 628 0.543 0.7049
A0A7W8LMF9 CBM48 69 692 32 779 0.5429 0.6427
AF-E0RN67-F1-model_v4 CBM48 130 692 125 667 0.5329 0.6676
A0A1E3V254 CBM0 22 696 81 785 0.5262 0.5845
AF-G0GBA8-F1-model_v4 CBM48 99 692 132 674 0.5245 0.6601
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
V5WID3 CBM48 25 692 36 663 0.5666 0.6222
A0A7G9FI53 CBM48 24 691 27 711 0.5595 0.5991
F8EWY1 CBM48 25 692 27 697 0.5565 0.5914
A0A5C1Q9F1 CBM48 70 692 35 655 0.554 0.6096
ULQ60875.1 CBM48 71 692 33 753 0.5456 0.6388
A0A5C1QAA2 CBM48 131 692 122 628 0.543 0.7049
A0A7W8LMF9 CBM48 69 692 32 779 0.5429 0.6427
G0GBA8 CBM48 99 692 132 674 0.5245 0.6601
A0A4V1ALA8 CBM9 21 696 76 799 0.5058 0.5692
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1nqf-assembly1.cif.gz_A 32 693 22 544 0.5313 0.6275
1nqe-assembly1.cif.gz_A 32 693 23 549 0.5274 0.6218
3rgn-assembly1.cif.gz_A 32 693 23 549 0.5264 0.6204
2ysu-assembly1.cif.gz_A 32 694 27 576 0.5188 0.6031
2gsk-assembly1.cif.gz_A 23 693 1 590 0.5135 0.5672
1nqg-assembly1.cif.gz_A 33 695 27 576 0.5133 0.5961
3m8d-assembly1.cif.gz_A 33 695 26 583 0.5121 0.591
1nqh-assembly1.cif.gz_A 33 695 27 584 0.5109 0.5895
6r2q-assembly1.cif.gz_B 67 694 39 649 0.5029 0.5609
5fr8-assembly2.cif.gz_B 28 696 21 707 0.4841 0.5204
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q6CZB5-F1-model_v4 1 693 1 615 0.5301 0.575
AF-A4WG45-F1-model_v4 1 693 1 615 0.5294 0.5745
AF-A7MXY8-F1-model_v4 3 693 3 617 0.5241 0.5703
AF-Q7MYE3-F1-model_v4 7 692 8 619 0.52 0.5693
AF-Q1CNP0-F1-model_v4 14 693 15 625 0.5193 0.571
AF-A4TRG0-F1-model_v4 14 693 15 625 0.5185 0.5697
AF-Q8ZAA1-F1-model_v4 14 693 15 625 0.5168 0.5678
AF-Q66G57-F1-model_v4 2 693 2 624 0.5115 0.5534
AF-A7ML93-F1-model_v4 21 692 11 616 0.5111 0.563
AF-Q57H87-F1-model_v4 23 695 11 614 0.5102 0.5622
Download Full SwissProt Results