PROTEIN: HRGMv2_0381_3_30
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Protein File & Metadata
Source:
HRGMv2_0381_3_30.pdb
Genome ID:
Protein ID:
HRGMv2_0381_3_30
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Protein Sequence
MKMDKRLLAA FLSFAFVCSA SCGCSKSDGG GDPEASVDGV TVKPAYNRSD VLHNPLNGWV 60 MYVSADYDPS YFDTEVYVPS LGMNVKVADY ASACYIRTKW SVLNPADGQY AWKDPDSKVY 120 KLVQAAREHN LPIAFRVVVD GRDQGANTPQ FVFDAGAKYA LENEKYPDRK TPMPQDPVFQ 180 KYYEKFVAAF AEEFNDPDRT AFIDGYGLGK WGEGHSVAYN EKDVSAVDEN TETVKREVLD 240 WITKLYARYF TKVPLVINYH RVIGHPTSEG AANPNSESLI ALAVSNGYCL RHDAFGMNNS 300 SWGYSTWEKA IAAQWRFKVP IIMEGGYIVG SHSYWNDPAG YRQGHPEDVR RGEYEASAEA 360 HVNMMDFRVG DETLSWFNDA FDLVRSFVSE GGYRLYPDQV IVPDQVNAGS RVKVFSRWRN 420 MGWGYMPNNL PQWNYKYKVA FALLDESDKA QQIFVDANCE PSTWVESKPF SYTFETSAVD 480 LPAGNYTWGI GIVDTSKEEL HPAIQIAVNN EKSAEGWVKL HEVRID 526
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05592-F1-model_v4 | 35 | 526 | 33 | 561 | 0.6636 |
0.7484 |
| AF-A0A175WEV7-F1-model_v4 | 13 | 470 | 14 | 411 | 0.5541 |
0.652 |
| AF-K7L4L5-F1-model_v4 | 4 | 514 | 24 | 532 | 0.5172 |
0.5582 |
| AF-Q8VYW2-F1-model_v4 | 5 | 421 | 34 | 508 | 0.5141 |
0.653 |
| AF-I1K673-F1-model_v4 | 6 | 510 | 26 | 532 | 0.5115 |
0.5579 |
| AF-C0PJY8-F1-model_v4 | 32 | 391 | 55 | 503 | 0.5082 |
0.7367 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 31 | 526 | 43 | 532 | 0.8166 |
0.9804 |
| AF-A0A165T486-F1-model_v4 | GH0 | 37 | 526 | 22 | 465 | 0.7444 |
0.8394 |
| AF-A0A859RHN9-F1-model_v4 | GH0 | 35 | 526 | 26 | 472 | 0.7336 |
0.8291 |
| AF-A0A6P1UZ86-F1-model_v4 | GH0 | 36 | 526 | 27 | 472 | 0.732 |
0.8288 |
| A0A1D8JPH9 | GH0 | 36 | 526 | 27 | 472 | 0.7308 |
0.8276 |
| AF-A0A4Y1VA35-F1-model_v4 | GH105 | 31 | 526 | 75 | 850 | 0.7094 |
0.9312 |
| A0A173ZNQ5 | GH105 | 35 | 526 | 371 | 850 | 0.7076 |
0.9595 |
| AF-A0A7D6XQG7-F1-model_v4 | GH105 | 35 | 526 | 371 | 850 | 0.7069 |
0.9582 |
| AF-A0A4P6RFD0-F1-model_v4 | GH105 | 37 | 526 | 373 | 850 | 0.7067 |
0.9623 |
| AF-U5VZX8-F1-model_v4 | CBM35 | 1 | 526 | 20 | 519 | 0.6439 |
0.7526 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UEG51675.1 | CBM92 | 31 | 526 | 43 | 532 | 0.8166 |
0.9804 |
| A0A173ZNQ5 | GH105 | 35 | 526 | 371 | 850 | 0.7076 |
0.9595 |
| USX25342.1 | CBM35 | 36 | 526 | 44 | 465 | 0.6225 |
0.8405 |
| A0A0G3BQ76 | CBM13 | 28 | 526 | 270 | 721 | 0.5854 |
0.7844 |
| A0A810P131 | CBM35 | 1 | 526 | 23 | 522 | 0.5746 |
0.7539 |
| UYZ64945.1 | CBM13 | 36 | 526 | 18 | 453 | 0.5732 |
0.7878 |
| UYZ63624.1 | CBM13 | 36 | 526 | 24 | 512 | 0.5705 |
0.7371 |
| BCP97900.1 | GH5_1 | 16 | 526 | 24 | 882 | 0.553 |
0.715 |
| A0A5B8M8R3 | CBM6 | 37 | 526 | 51 | 534 | 0.5462 |
0.8156 |
| A0A3G3K0E0 | CBM35 | 37 | 526 | 39 | 470 | 0.5425 |
0.8201 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4awe-assembly1.cif.gz_A | 19 | 421 | 7 | 381 | 0.5645 |
0.6755 |
| 5oq3-assembly1.cif.gz_A | 54 | 389 | 1 | 358 | 0.5567 |
0.7126 |
| 1itc-assembly1.cif.gz_A | 54 | 510 | 9 | 510 | 0.5166 |
0.5957 |
| 4zn2-assembly3.cif.gz_C | 48 | 422 | 11 | 355 | 0.5112 |
0.6846 |
| 6jow-assembly2.cif.gz_D | 52 | 510 | 1 | 708 | 0.4311 |
0.5811 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5AZ53-F1-model_v4 | 52 | 420 | 33 | 399 | 0.5492 |
0.6842 |
| AF-Q0C8J3-F1-model_v4 | 53 | 420 | 41 | 406 | 0.5461 |
0.6877 |
| AF-Q8VYW2-F1-model_v4 | 5 | 421 | 34 | 508 | 0.5141 |
0.653 |