PROTEIN: HRGMv2_0360_1_1870
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Protein File & Metadata
Source:
HRGMv2_0360_1_1870.pdb
Genome ID:
Protein ID:
HRGMv2_0360_1_1870
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Protein Sequence
MKRLLSLDVL RGITVCGMIL VNNAGGSVSY APLRHSVWNG LTPCDLVFPF FLFMVGISTY 60 ISLRKFDFRP SHEVVKKIFR RTFLIILIGL GIEWFGYACK GEFFPIDTLR IPGVLQRIGL 120 CYGIVSLMVI YIRHKYLPWI AGGLLVVYSI LLLVGNGYAC DDTNILAVVD RDIFGEAHLY 180 KKSPVDPEGL MATLSAVAHT LIGFLCGKLL LEKIPVSQRV VKLITVAVMM LAAGYILSIW 240 MPLNKRVWST SFVFVTCGWG SLLLALLMYV IDVKEVNKGW TFFLVFGMNP LFLYVLSEVV 300 AIAFSEWGIR KVIYQSILVV FTDPYFASLI YALLFCSLMC ITGYILHRKK IYIKI 355
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 355 | 43 | 426 | 0.8585 |
0.9442 |
| AF-A0A368UJV1-F1-model_v4 | 1 | 355 | 19 | 455 | 0.8105 |
0.9205 |
| AF-K7KGM5-F1-model_v4 | 1 | 355 | 27 | 465 | 0.8104 |
0.9279 |
| AF-I1NBX1-F1-model_v4 | 1 | 355 | 26 | 464 | 0.8095 |
0.9263 |
| AF-Q94CC1-F1-model_v4 | 1 | 355 | 34 | 472 | 0.8048 |
0.9274 |
| AF-B4FES9-F1-model_v4 | 1 | 355 | 40 | 484 | 0.7977 |
0.9286 |
| AF-Q5JK28-F1-model_v4 | 1 | 355 | 50 | 488 | 0.7964 |
0.93 |
| AF-Q5WMX9-F1-model_v4 | 1 | 355 | 52 | 491 | 0.7953 |
0.931 |
| AF-K7LGV3-F1-model_v4 | 1 | 355 | 52 | 489 | 0.795 |
0.9293 |
| AF-A0A1D6FME0-F1-model_v4 | 1 | 355 | 55 | 513 | 0.7835 |
0.9336 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6127 |
0.9547 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 355 | 858 | 1227 | 0.6127 |
0.9547 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 1 | 355 | 113 | 446 | 0.7236 |
0.8654 |
| AF-B3H6K1-F1-model_v4 | 2 | 355 | 104 | 434 | 0.717 |
0.8553 |
| AF-Q9UTL4-F1-model_v4 | 1 | 355 | 117 | 459 | 0.7087 |
0.8373 |
| AF-Q754I2-F1-model_v4 | 1 | 355 | 110 | 480 | 0.7003 |
0.8159 |
| AF-Q2UQH4-F1-model_v4 | 1 | 355 | 129 | 500 | 0.6971 |
0.825 |
| AF-Q6FLH2-F1-model_v4 | 1 | 355 | 115 | 486 | 0.6965 |
0.8158 |
| AF-P47026-F1-model_v4 | 1 | 355 | 120 | 490 | 0.6963 |
0.818 |
| AF-Q6CAW6-F1-model_v4 | 1 | 355 | 122 | 478 | 0.6956 |
0.8091 |
| AF-Q873N2-F1-model_v4 | 1 | 355 | 114 | 485 | 0.6952 |
0.8138 |
| AF-Q3UDW8-F1-model_v4 | 1 | 355 | 258 | 656 | 0.6949 |
0.9067 |