PROTEIN: HRGMv2_0354_40_12
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Protein File & Metadata
Source:
HRGMv2_0354_40_12.pdb
Genome ID:
Protein ID:
HRGMv2_0354_40_12
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Protein Sequence
MNQKKNIVII STMYYPDMGA PSAVLDKYVK KLEDKYNFFI LSKTFEMDVK DQYRIRYITS 60 KIHKLQVLCE NNIKEKKYFK LNKLMLLAIN AYKLLINQFS YPFFNSWEIN AYYTAIKTLS 120 REIKIDAIIS VANTWTCQFS AMKYKKEQPS IKWLSFILDP FSNFHIYYKY KLFKSYWKRR 180 NIKNEKLIYD TADYLLFSEE MYKFAVDKFN VSKDKAFNMG FALDDIRKGR KPSILSSGKP 240 IKMIYAGMFY QQIRNPEFML ETLNNVDNIK VDLFVDRCEC EDLLTSHVSE KIKRHPFANR 300 DRYEQMICDE YDILLSVGNI STLQAPSKTL ELLSTGRPII HFYFAKDSQF EMIEKYPLGL 360 NIANGESDAA SKISEFCKKV KGKCLSFDNV LELYPEHSLD KKTALLESLI ER 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1J7-F1-model_v4 | 2 | 411 | 1 | 401 | 0.7871 |
0.8173 |
| AF-Q2G1K0-F1-model_v4 | 5 | 412 | 1 | 369 | 0.7802 |
0.8407 |
| AF-Q58469-F1-model_v4 | 2 | 412 | 1 | 389 | 0.7747 |
0.8187 |
| AF-Q9HZ80-F1-model_v4 | 5 | 412 | 1 | 409 | 0.7696 |
0.7965 |
| AF-Q5FAE0-F1-model_v4 | 5 | 412 | 1 | 388 | 0.7616 |
0.8033 |
| AF-A0A0H3GSJ8-F1-model_v4 | 2 | 412 | 1 | 349 | 0.7569 |
0.8422 |
| AF-Q0P9C7-F1-model_v4 | 4 | 412 | 1 | 365 | 0.7569 |
0.8221 |
| AF-F4IBV4-F1-model_v4 | 1 | 412 | 5 | 398 | 0.7568 |
0.801 |
| AF-A0A0H5RZC5-F1-model_v4 | 5 | 412 | 1 | 402 | 0.7546 |
0.7861 |
| AF-Q59002-F1-model_v4 | 5 | 412 | 1 | 383 | 0.7543 |
0.808 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UVR78230.1 | GT0 | 5 | 412 | 1 | 412 | 0.9655 |
0.9808 |
| A0A139KCQ5 | GT0 | 5 | 412 | 1 | 413 | 0.9477 |
0.9674 |
| AF-T1SF07-F1-model_v4 | GT4 | 1 | 411 | 3 | 424 | 0.8605 |
0.8919 |
| AF-M1VK77-F1-model_v4 | GT4 | 1 | 411 | 3 | 424 | 0.859 |
0.8906 |
| AF-A0A1P8VR31-F1-model_v4 | GT4 | 1 | 411 | 3 | 424 | 0.8587 |
0.8904 |
| A0A085EJF9 | GT4 | 1 | 412 | 7 | 437 | 0.8448 |
0.8908 |
| A0A943T7V0 | GT0 | 5 | 412 | 1 | 409 | 0.8412 |
0.8664 |
| AF-B9DUI6-F1-model_v4 | GT0 | 4 | 412 | 1 | 402 | 0.833 |
0.8652 |
| AF-A0A4U9YKQ8-F1-model_v4 | GT0 | 4 | 412 | 1 | 403 | 0.8324 |
0.8633 |
| AF-F6AVN9-F1-model_v4 | GT4 | 5 | 412 | 1 | 418 | 0.8303 |
0.863 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| T1SF07 | GT4 | 1 | 411 | 3 | 424 | 0.8605 |
0.8919 |
| A0A0W0VWK4 | GT4 | 5 | 412 | 1 | 431 | 0.8454 |
0.8883 |
| A0A085EJF9 | GT4 | 1 | 412 | 7 | 437 | 0.8448 |
0.8908 |
| A0A517ZPG7 | GT4 | 5 | 412 | 1 | 433 | 0.837 |
0.8942 |
| A0A3P7RXJ6 | GT4 | 2 | 412 | 1 | 414 | 0.831 |
0.8551 |
| F6AVN9 | GT4 | 5 | 412 | 1 | 418 | 0.8303 |
0.863 |
| A0A1Y0EIW0 | GT4 | 5 | 412 | 1 | 426 | 0.8296 |
0.8762 |
| SQG09080.1 | GT4 | 5 | 412 | 1 | 419 | 0.8282 |
0.8687 |
| A0A1B1YNF7 | GT4 | 4 | 412 | 1 | 412 | 0.8245 |
0.8487 |
| C6BTJ2 | GT4 | 2 | 412 | 1 | 392 | 0.8243 |
0.8603 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly1.cif.gz_B | 4 | 412 | 1 | 364 | 0.7581 |
0.8269 |
| 3mbo-assembly3.cif.gz_F | 4 | 412 | 1 | 364 | 0.7549 |
0.8234 |
| 3mbo-assembly4.cif.gz_G | 4 | 412 | 1 | 360 | 0.7545 |
0.8265 |
| 2jjm-assembly1.cif.gz_B | 4 | 412 | 1 | 357 | 0.7525 |
0.8259 |
| 7qsg-assembly1.cif.gz_A | 2 | 412 | 1 | 377 | 0.7514 |
0.8068 |
| 5d01-assembly1.cif.gz_B | 2 | 412 | 1 | 358 | 0.7493 |
0.8218 |
| 5d00-assembly1.cif.gz_A | 2 | 412 | 1 | 358 | 0.7485 |
0.8217 |
| 6tvp-assembly1.cif.gz_A | 3 | 412 | 1 | 385 | 0.7461 |
0.7919 |
| 3mbo-assembly4.cif.gz_H | 4 | 412 | 1 | 364 | 0.7459 |
0.8151 |
| 3c4q-assembly2.cif.gz_B | 5 | 412 | 1 | 388 | 0.7446 |
0.7912 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58469-F1-model_v4 | 2 | 412 | 1 | 389 | 0.7747 |
0.8187 |
| AF-Q8KIU8-F1-model_v4 | 3 | 412 | 1 | 393 | 0.7656 |
0.8102 |
| AF-Q0P9C7-F1-model_v4 | 4 | 412 | 1 | 365 | 0.7569 |
0.8221 |
| AF-P9WMZ2-F1-model_v4 | 4 | 412 | 1 | 380 | 0.7553 |
0.8077 |
| AF-Q59002-F1-model_v4 | 5 | 412 | 1 | 383 | 0.7543 |
0.808 |
| AF-O32267-F1-model_v4 | 1 | 412 | 1 | 395 | 0.7493 |
0.7898 |
| AF-Q4H4F8-F1-model_v4 | 18 | 412 | 1 | 381 | 0.7491 |
0.8054 |
| AF-Q4JAK2-F1-model_v4 | 4 | 412 | 1 | 350 | 0.7481 |
0.8274 |
| AF-P9WMZ3-F1-model_v4 | 4 | 412 | 1 | 380 | 0.7471 |
0.8006 |
| AF-P9WMZ1-F1-model_v4 | 5 | 412 | 1 | 384 | 0.7466 |
0.7949 |