PROTEIN: HRGMv2_0341_3_58
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Protein File & Metadata
Source:
HRGMv2_0341_3_58.pdb
Genome ID:
Protein ID:
HRGMv2_0341_3_58
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Protein Sequence
MKSLLLVSIL LSCFLLHESG NACTSVIVSG KVTPDGRPLM WKHRDTGTRY NHITFEKGEK 60 YNFLGLVNSD STDYDIWTGV NEAGFAIMNT ASFNLKDDDV QEMDHEGRLM RRALEICKNQ 120 QDFEHFLDTL SRPMRVEANF GIIDAFGGAA YYETNNTRYY KKDVNDPNLA PDGYLVYTNF 180 SFEGRKDEGY GYIRYESAKK IFADIYPQGL TPRSIFQEVS HSFYHSLFRK DMKEEKNTEW 240 QLEQDLIPRF ESTASIVIQG VKNGMNPELT TMWTELGYPP TAIALPLWVK LGEQQPELVL 300 YSPQFKTAPL CYFATLLKTQ AYPIHRGNGQ KYIHWSELWN AQGTGYIQTL TPVWNDIYDL 360 FARHQAEWEE KGLDVEAINR LYQEAEEKIK PTYYHLMLVD 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZQ55-F1-model_v4 | 14 | 400 | 11 | 471 | 0.7201 |
0.8292 |
| AF-A0A077ZFA6-F1-model_v4 | 16 | 400 | 10 | 465 | 0.7189 |
0.8229 |
| AF-Q9VI64-F1-model_v4 | 20 | 394 | 1 | 353 | 0.6972 |
0.7561 |
| AF-Q6AY84-F1-model_v4 | 16 | 394 | 1 | 414 | 0.694 |
0.7588 |
| AF-Q3TMH2-F1-model_v4 | 15 | 399 | 1 | 418 | 0.693 |
0.7503 |
| AF-Q9CZC8-F1-model_v4 | 16 | 394 | 1 | 414 | 0.6928 |
0.7576 |
| AF-Q0VDG4-F1-model_v4 | 15 | 400 | 1 | 421 | 0.6928 |
0.7533 |
| AF-Q12765-F1-model_v4 | 15 | 394 | 1 | 414 | 0.6921 |
0.7554 |
| AF-A0A0G2K189-F1-model_v4 | 15 | 399 | 1 | 418 | 0.6911 |
0.7481 |
| AF-Q9HVB8-F1-model_v4 | 22 | 400 | 1 | 399 | 0.6901 |
0.7533 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A495MGD5 | CBM48 | 1 | 346 | 5 | 348 | 0.5299 |
0.6691 |
| AF-A0A7U7CXM2-F1-model_v4 | CBM48 | 1 | 346 | 2 | 346 | 0.5241 |
0.6589 |
| AF-A0A7T7V2N8-F1-model_v4 | CBM48 | 4 | 342 | 8 | 365 | 0.5167 |
0.6554 |
| A0A1A6CBZ3 | CBM48 | 5 | 342 | 7 | 363 | 0.5138 |
0.6533 |
| A0A9E9JXR8 | CBM0 | 6 | 400 | 336 | 1045 | 0.4092 |
0.6078 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A495MGD5 | CBM48 | 1 | 346 | 5 | 348 | 0.5299 |
0.6691 |
| A0A7U7CXM2 | CBM48 | 1 | 346 | 2 | 346 | 0.5241 |
0.6589 |
| A0A1A6CBZ3 | CBM48 | 5 | 342 | 7 | 363 | 0.5138 |
0.6533 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5img-assembly1.cif.gz_D | 16 | 400 | 1 | 456 | 0.7223 |
0.8203 |
| 5imh-assembly1.cif.gz_E | 16 | 400 | 1 | 456 | 0.6995 |
0.7958 |
| 3gvz-assembly2.cif.gz_B | 23 | 309 | 1 | 256 | 0.6754 |
0.8344 |
| 6dxx-assembly3.cif.gz_F | 23 | 315 | 1 | 231 | 0.6395 |
0.8217 |
| 6dxy-assembly2.cif.gz_D | 23 | 318 | 1 | 230 | 0.6377 |
0.8205 |
| 6dxz-assembly1.cif.gz_B | 23 | 318 | 1 | 230 | 0.6368 |
0.8194 |
| 6dy3-assembly4.cif.gz_H | 23 | 318 | 1 | 234 | 0.6354 |
0.8127 |
| 6dy2-assembly2.cif.gz_D | 23 | 315 | 1 | 232 | 0.6352 |
0.8149 |
| 4bwc-assembly1.cif.gz_B-2 | 23 | 379 | 1 | 321 | 0.5901 |
0.6711 |
| 8esl-assembly1.cif.gz_D | 23 | 383 | 1 | 284 | 0.5819 |
0.7061 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9A0M0-F1-model_v4 | 16 | 400 | 3 | 461 | 0.7316 |
0.833 |
| AF-P0DD25-F1-model_v4 | 21 | 400 | 1 | 454 | 0.7313 |
0.8376 |
| AF-P0DD24-F1-model_v4 | 21 | 400 | 1 | 454 | 0.7311 |
0.8375 |
| AF-Q5XD16-F1-model_v4 | 21 | 400 | 1 | 454 | 0.7307 |
0.837 |
| AF-Q8P1N3-F1-model_v4 | 17 | 400 | 4 | 461 | 0.7306 |
0.8343 |
| AF-Q9CIV4-F1-model_v4 | 21 | 400 | 1 | 448 | 0.7274 |
0.8292 |
| AF-Q48841-F1-model_v4 | 15 | 400 | 2 | 460 | 0.7252 |
0.825 |
| AF-Q48558-F1-model_v4 | 18 | 400 | 1 | 463 | 0.7213 |
0.8281 |
| AF-Q9CFC3-F1-model_v4 | 16 | 400 | 4 | 463 | 0.7207 |
0.8236 |
| AF-Q8NZ57-F1-model_v4 | 9 | 400 | 12 | 487 | 0.7081 |
0.813 |