PROTEIN: HRGMv2_0341_39_21
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Protein File & Metadata
Source:
HRGMv2_0341_39_21.pdb
Genome ID:
Protein ID:
HRGMv2_0341_39_21
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Protein Sequence
MKQITCIILA AMLLLCGGFG YEHLLAGRST DINRNGELSD IAESVTAIPL KPINGRSLTE 60 AHDIQKEGND LFLISQGVLY RFNRQGELIC QITDPEEIQV AGYLVHSLKR QLIVLGNVND 120 IYYYTFDGEL LFKKKLRKDF NEEQLMSAVL HRGKIYTAER VMATDTLRRP CIKQQVQVYD 180 TYFRPLESHP IVETALSHPV LSPNTQAVCL RVSPGGRIYA YSAPCESEHL LRDSLYLHQQ 240 GEMAGVNEDD VPLLPVSLGS RYWLAVNQHA EEADRRYVFC WDCYDNQAWE LNDGFTDDFF 300 QTGSVAALEP MDLYGHTYSF TKRGETLRHA FPEAADSTVV FIVRMKA 347
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A077ZIR2-F1-model_v4 | 33 | 346 | 17 | 317 | 0.451 |
0.6142 |
| AF-C0NAK8-F1-model_v4 | 20 | 347 | 173 | 580 | 0.4397 |
0.5906 |
| AF-A0A0K0DTM7-F1-model_v4 | 7 | 347 | 277 | 618 | 0.4384 |
0.5772 |
| AF-A0A368UHK5-F1-model_v4 | 3 | 347 | 716 | 1086 | 0.3763 |
0.5804 |
| AF-Q6NYH1-F1-model_v4 | 38 | 347 | 1 | 315 | 0.3449 |
0.5915 |
| AF-A0A3Q0KUF1-F1-model_v4 | 39 | 347 | 1 | 315 | 0.3393 |
0.5839 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5ex7-assembly1.cif.gz_A | 31 | 347 | 1 | 274 | 0.596 |
0.6883 |
| 4zlr-assembly1.cif.gz_A | 31 | 347 | 1 | 273 | 0.5917 |
0.6896 |
| 8wca-assembly1.cif.gz_B | 19 | 344 | 16 | 327 | 0.5472 |
0.6117 |
| 8shj-assembly3.cif.gz_C | 39 | 344 | 1 | 306 | 0.544 |
0.601 |
| 5mwj-assembly1.cif.gz_A | 23 | 346 | 17 | 324 | 0.5342 |
0.6011 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9W1J3-F1-model_v4 | 30 | 347 | 163 | 505 | 0.4312 |
0.6123 |
| AF-E1BD59-F1-model_v4 | 33 | 347 | 458 | 729 | 0.4068 |
0.685 |
| AF-Q6NYH1-F1-model_v4 | 38 | 347 | 1 | 315 | 0.3449 |
0.5915 |