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PROTEIN: HRGMv2_0341_29_20

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_0341_29_20.pdb
Genome ID:
HRGMv2_0341
Protein ID:
HRGMv2_0341_29_20

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKKLKSAFYL   FAAALMTFSA   CSDDEDPVPD   NGNDNNGQVE   ASSYHFDIFM   TIGQHGGMNR 60
GDGTIVKSVS   SLDAGQPMID   IRNDGVEFRS   EDVTYSMEAI   VKGKYYYQIP   TSNDRFTKLQ 120
VVDNSVKVIQ   EQPFVENTYK   VRSYTHAWLD   DNILLIMAAN   GDADKIIWTK   LNTDDMHIVG 180
EGTLDLPLPE   DAKVFNASGI   LTYNESAGKL   FYFYFAKDKS   GRYGKATSNF   LTAVINPSTM 240
AVESNKVNSL   AHEMAGSAYG   ELLQSIVLYQ   DGDLYLAAFS   DEDDIEKGHL   LRIKKGETDF 300
DASYEGYPNA   DGKLLTIQNL   GNGKALAYAR   NDAAGTDIDD   FSHYYTIIDL   STGERSRLSY 360
QGAEIPYSAG   RFAQRSVIVD   GKAYIGVNTQ   DANPCIYIYD   IATGNVEKGV   EIAEGYYFDM 420
IRLLENE 427
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A175VRT9-F1-model_v4 43 425 24 395 0.6368 0.7186
AF-U7PNC4-F1-model_v4 20 425 27 415 0.6113 0.6809
AF-Q93VD5-F1-model_v4 41 427 90 550 0.6042 0.7574
AF-Q9TXT9-F1-model_v4 41 427 31 530 0.6038 0.7451
AF-A0A0H3GTG8-F1-model_v4 35 421 45 350 0.5912 0.7531
AF-Q32F51-F1-model_v4 35 421 45 350 0.5889 0.7503
AF-P76116-F1-model_v4 35 421 45 350 0.5889 0.7496
AF-Q8ZPD6-F1-model_v4 67 427 31 327 0.5888 0.7683
AF-A0A0D2GPG7-F1-model_v4 5 427 21 477 0.5856 0.6571
AF-Q55CT9-F1-model_v4 14 427 7 311 0.5846 0.7068
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7T0NWA1-F1-model_v4 GH0 18 427 21 387 0.6115 0.7103
AF-A0A2H5BCD4-F1-model_v4 GH0 35 405 57 449 0.6022 0.7211
A0A1E7N6R5 GH0 35 404 70 462 0.5955 0.7241
AF-A0A7I8FSR3-F1-model_v4 GH0 35 405 44 409 0.5938 0.6982
A0A1Y0FP43 GH0 35 405 47 412 0.5896 0.6956
AF-A0A1Y0FP43-F1-model_v4 GH0 35 405 47 412 0.5896 0.6956
AF-A0A6I6M5X3-F1-model_v4 PL42 33 405 41 432 0.5872 0.6904
AF-F5IZ43-F1-model_v4 PL42 33 423 41 428 0.5846 0.6629
AF-A0A4P6L6U8-F1-model_v4 PL42 33 405 45 436 0.5816 0.687
AF-G8TK61-F1-model_v4 PL42 33 423 45 432 0.5801 0.661
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UII20320.1 PL42 1 404 9 461 0.5719 0.6449
WHH59204.1 GH33 45 424 5 351 0.562 0.6487
A0A517XT92 GH33 48 405 1 308 0.5577 0.6667
E4RR37 GH33 17 425 7 335 0.5548 0.6521
A0A5C0ZDH1 PL42 33 423 89 476 0.5535 0.6556
G8UMX9 GH33 45 424 33 346 0.543 0.6763
A0A5Q0BGV0 GH33 23 408 41 377 0.5366 0.6491
A0A7M3TDA7 GH33 27 427 33 393 0.5286 0.6137
QWE11779.1 GH33 25 406 34 411 0.5213 0.6032
A0A5B8VH22 GH43_18 12 414 37 338 0.5076 0.641
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
7seu-assembly4.cif.gz_D 34 421 14 312 0.6228 0.768
4rsc-assembly1.cif.gz_B 41 427 35 505 0.6173 0.7468
3dsm-assembly1.cif.gz_A 35 427 48 327 0.6028 0.8007
6n01-assembly1.cif.gz_B 41 427 1 361 0.5999 0.6697
7on7-assembly2.cif.gz_B 39 424 1 272 0.5934 0.7414
4nlm-assembly1.cif.gz_A 35 416 17 323 0.5932 0.7271
2ad8-assembly1.cif.gz_A 29 427 18 516 0.5381 0.6657
7aq9-assembly1.cif.gz_B 42 427 11 448 0.5377 0.6887
6y7e-assembly1.cif.gz_B 42 427 11 448 0.5351 0.6885
5i5i-assembly1.cif.gz_A 42 427 7 410 0.5347 0.6661
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q4L7N4-F1-model_v4 41 425 1 344 0.6632 0.7544
AF-Q99SW6-F1-model_v4 43 424 1 342 0.659 0.7527
AF-Q6GFD5-F1-model_v4 43 424 1 342 0.6578 0.7515
AF-Q49YW6-F1-model_v4 41 425 1 345 0.6573 0.7487
AF-Q8CRT1-F1-model_v4 43 424 1 342 0.6566 0.7497
AF-O23264-F1-model_v4 27 427 29 482 0.6143 0.7123
AF-Q93VD5-F1-model_v4 41 427 90 550 0.6042 0.7574
AF-Q8LIY8-F1-model_v4 41 427 106 565 0.5955 0.7555
AF-Q8X9X2-F1-model_v4 67 427 30 327 0.5907 0.7689
AF-P76116-F1-model_v4 35 421 45 350 0.5889 0.7496
Download Full SwissProt Results