PROTEIN: HRGMv2_0341_11_50
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Protein File & Metadata
Source:
HRGMv2_0341_11_50.pdb
Genome ID:
Protein ID:
HRGMv2_0341_11_50
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Protein Sequence
MAEQRPRIMY FKEYLPTPVC VVLSMFFALV FQFNGGVFLP TAVQMSRALG CIQEDVMMAG 60 YASFIGMTLI FPILFRLKFR FTTRRIFLTV CPVLIVCNLI TLHVNSLPIF ILVCLVSGFF 120 RMWGTFECFS NMRLSVTPSG NFSVFYPVIY IIVLESIQLS GLVATHISDW ANWRYMHWFV 180 IGMLLIVWAC VWFFTRPFRM MKKLPLYGID WIGGLLWGVI LFSIVFICIY GEFYDWTDSM 240 EIRASIVIAV VALLVNINRM LTIKRPYIEP QVFTYRNFPV ILFLFLMLCF FLTTSSVLQN 300 QFMTAILHYD SLNAISLNWC VFVGILAGAA VVFYRQVILR KGFKLLISVG FLFIVIYQYY 360 MYFLIHPNLN IESLYFPNFL KGIGHGILYI ALTIYVAKSV PFKHFFQGLC VLSFIRTSIA 420 TPLGTAILSR WMRHLQQENI GLLSRRIDGI RDWMPQLSIK NLYAAVSQQT MLTSLKELFG 480 IVCIFGTLFL ICIFTYRIWR KHLPLKYRRR I 511
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-G3XD81-F1-model_v4 | 6 | 501 | 4 | 497 | 0.8315 |
0.8746 |
| AF-Q5F680-F1-model_v4 | 5 | 501 | 3 | 498 | 0.8289 |
0.8643 |
| AF-P52600-F1-model_v4 | 8 | 501 | 7 | 504 | 0.8202 |
0.8668 |
| AF-Q9I4A2-F1-model_v4 | 1 | 509 | 1 | 503 | 0.8133 |
0.8387 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 501 | 5 | 500 | 0.8104 |
0.8524 |
| AF-Q9HZ88-F1-model_v4 | 21 | 501 | 1 | 485 | 0.8091 |
0.8647 |
| AF-A0A0H3GPJ5-F1-model_v4 | 5 | 510 | 4 | 472 | 0.8078 |
0.8639 |
| AF-Q9I482-F1-model_v4 | 6 | 508 | 5 | 474 | 0.8075 |
0.8659 |
| AF-A0A0H3GNL5-F1-model_v4 | 5 | 509 | 9 | 518 | 0.8056 |
0.8399 |
| AF-A0A133CZJ2-F1-model_v4 | 1 | 501 | 1 | 478 | 0.8039 |
0.859 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 4 | 511 | 9 | 540 | 0.734 |
0.7888 |
| ARF89445.1 | GT1 | 1 | 508 | 141 | 957 | 0.6568 |
0.8649 |
| AF-A2S189-F1-model_v4 | GH3 | 3 | 509 | 4 | 416 | 0.6545 |
0.746 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 7 | 509 | 19 | 465 | 0.6534 |
0.7457 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 4 | 500 | 29 | 518 | 0.604 |
0.8246 |
| AF-A0A1D7Y1M4-F1-model_v4 | GH17 | 1 | 501 | 2 | 458 | 0.558 |
0.752 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 511 | 123 | 756 | 0.5579 |
0.6819 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 4 | 511 | 357 | 828 | 0.5554 |
0.746 |
| A0A918L8E6 | GT2 | 5 | 511 | 1 | 417 | 0.5527 |
0.766 |
| A0A3C1RID2 | GH17 | 1 | 500 | 6 | 455 | 0.5503 |
0.7542 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 4 | 511 | 9 | 540 | 0.734 |
0.7888 |
| ARF89445.1 | GT1 | 1 | 508 | 141 | 957 | 0.6568 |
0.8649 |
| A2S189 | GH3 | 3 | 509 | 4 | 416 | 0.6545 |
0.746 |
| A0A387HHJ8 | GT1 | 4 | 500 | 29 | 518 | 0.604 |
0.8246 |
| A0A7H8RF34 | CBM24 | 1 | 511 | 123 | 756 | 0.5579 |
0.6819 |
| A0A918L8E6 | GT2 | 5 | 511 | 1 | 417 | 0.5527 |
0.766 |
| A0A3C1RID2 | GH17 | 1 | 500 | 6 | 455 | 0.5503 |
0.7542 |
| S5VEU6 | CE14 | 1 | 404 | 13 | 402 | 0.5399 |
0.8532 |
| A0A9Q9RZ67 | GH78 | 6 | 497 | 748 | 1440 | 0.5345 |
0.8257 |
| A0A7H1AHD7 | GH43_1 | 3 | 501 | 9 | 479 | 0.5216 |
0.6991 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 5 | 511 | 1 | 483 | 0.7805 |
0.8218 |
| 8pnl-assembly2.cif.gz_C | 5 | 511 | 1 | 486 | 0.7727 |
0.8126 |
| 7y58-assembly1.cif.gz_A | 8 | 501 | 1 | 502 | 0.7647 |
0.8087 |
| 7d5p-assembly2.cif.gz_B | 20 | 501 | 1 | 413 | 0.739 |
0.8333 |
| 7d5p-assembly1.cif.gz_A | 18 | 501 | 1 | 408 | 0.7386 |
0.8368 |
| 7d5q-assembly2.cif.gz_B | 20 | 511 | 1 | 411 | 0.7354 |
0.831 |
| 7d5q-assembly1.cif.gz_A | 20 | 501 | 1 | 403 | 0.7304 |
0.832 |
| 6kkl-assembly1.cif.gz_A | 15 | 508 | 1 | 371 | 0.7186 |
0.8471 |
| 8b1j-assembly1.cif.gz_A | 5 | 511 | 1 | 451 | 0.7109 |
0.7747 |
| 6oom-assembly2.cif.gz_A-2 | 11 | 500 | 1 | 392 | 0.71 |
0.8196 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0DPR7-F1-model_v4 | 1 | 509 | 3 | 510 | 0.8297 |
0.8547 |
| AF-Q9RQ29-F1-model_v4 | 5 | 501 | 3 | 498 | 0.8288 |
0.8659 |
| AF-P0AEJ1-F1-model_v4 | 7 | 501 | 3 | 501 | 0.8226 |
0.8672 |
| AF-P0AEJ0-F1-model_v4 | 7 | 501 | 3 | 501 | 0.8216 |
0.8663 |
| AF-P52600-F1-model_v4 | 8 | 501 | 7 | 504 | 0.8202 |
0.8668 |
| AF-P44927-F1-model_v4 | 8 | 501 | 7 | 504 | 0.8199 |
0.8648 |
| AF-P32369-F1-model_v4 | 3 | 505 | 4 | 474 | 0.8085 |
0.8641 |
| AF-P96712-F1-model_v4 | 4 | 499 | 1 | 498 | 0.7919 |
0.8315 |
| AF-P94574-F1-model_v4 | 7 | 511 | 1 | 452 | 0.7916 |
0.8573 |
| AF-Q92EE1-F1-model_v4 | 7 | 501 | 8 | 468 | 0.7886 |
0.8558 |