PROTEIN: HRGMv2_0329_20_32
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Protein File & Metadata
Source:
HRGMv2_0329_20_32.pdb
Genome ID:
Protein ID:
HRGMv2_0329_20_32
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Protein Sequence
MLKIKRYYTA LDRYRRSKGY GIHSPFAFRF VLKVLRERSG YYAYQTIRDG RNLALVRMVE 60 EGISSRKVLS NKNARLIFRV VNFFNPSAII QFGSNYGVSA ICALSASSKS QLWLLEPKAR 120 EYSIVKDVVQ GNSARIHAFG NVGDCIDSYL QAEERPFVIV NGVSVDNLPA VGQFLKTVVG 180 NNGVIVMRNM ASSSEVYGLW SGVIRSMEYG MSFTNGKIGV VVASRKLPLQ HFSLWF 236
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0F5U0-F1-model_v4 | 36 | 224 | 1 | 199 | 0.674 |
0.7901 |
| AF-Q86IC9-F1-model_v4 | 5 | 225 | 5 | 230 | 0.6719 |
0.7337 |
| AF-Q86IC8-F1-model_v4 | 5 | 225 | 6 | 231 | 0.6691 |
0.7314 |
| AF-Q9I4D8-F1-model_v4 | 10 | 224 | 1 | 220 | 0.6617 |
0.7262 |
| AF-K0F195-F1-model_v4 | 38 | 227 | 14 | 223 | 0.6575 |
0.8108 |
| AF-A0A0H3GP25-F1-model_v4 | 39 | 225 | 20 | 224 | 0.6572 |
0.8215 |
| AF-A0A5K4F4E6-F1-model_v4 | 9 | 224 | 3 | 231 | 0.6517 |
0.7275 |
| AF-Q9XXH0-F1-model_v4 | 35 | 224 | 8 | 217 | 0.6457 |
0.7861 |
| AF-Q5F8M4-F1-model_v4 | 36 | 224 | 16 | 222 | 0.6441 |
0.7952 |
| AF-Q965W3-F1-model_v4 | 2 | 224 | 1 | 226 | 0.64 |
0.6904 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1D8K9B5 | GT2 | 1 | 236 | 50 | 471 | 0.4077 |
0.7042 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5x7f-assembly1.cif.gz_A-2 | 14 | 224 | 3 | 198 | 0.67 |
0.7591 |
| 8gxo-assembly1.cif.gz_B | 3 | 225 | 3 | 211 | 0.6692 |
0.737 |
| 3tr6-assembly1.cif.gz_A-2 | 8 | 225 | 1 | 222 | 0.6691 |
0.7284 |
| 8c9t-assembly2.cif.gz_B | 38 | 225 | 14 | 221 | 0.6662 |
0.8225 |
| 2hnk-assembly1.cif.gz_C | 10 | 226 | 1 | 231 | 0.6659 |
0.7377 |
| 3tfw-assembly1.cif.gz_B-2 | 39 | 225 | 16 | 220 | 0.6652 |
0.8242 |
| 7cvv-assembly1.cif.gz_A | 37 | 224 | 11 | 219 | 0.6647 |
0.8187 |
| 5zw3-assembly1.cif.gz_B | 36 | 226 | 10 | 193 | 0.6639 |
0.7895 |
| 5log-assembly1.cif.gz_A | 7 | 226 | 1 | 222 | 0.6637 |
0.7163 |
| 2hnk-assembly2.cif.gz_B-2 | 8 | 226 | 1 | 231 | 0.6627 |
0.7302 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O32036-F1-model_v4 | 10 | 225 | 5 | 217 | 0.6349 |
0.6997 |
| AF-P0DUL6-F1-model_v4 | 10 | 225 | 1 | 252 | 0.6254 |
0.7246 |
| AF-B8NI24-F1-model_v4 | 36 | 224 | 30 | 247 | 0.6252 |
0.8076 |
| AF-A1UQU8-F1-model_v4 | 34 | 224 | 12 | 209 | 0.6085 |
0.7381 |
| AF-Q662I7-F1-model_v4 | 37 | 224 | 11 | 208 | 0.608 |
0.7371 |
| AF-B7J1B0-F1-model_v4 | 37 | 224 | 11 | 208 | 0.6079 |
0.7371 |
| AF-P53363-F1-model_v4 | 37 | 224 | 11 | 208 | 0.6068 |
0.7357 |
| AF-Q0SNY7-F1-model_v4 | 37 | 224 | 11 | 208 | 0.6056 |
0.7344 |
| AF-Q8KAK0-F1-model_v4 | 34 | 224 | 12 | 217 | 0.6039 |
0.7346 |
| AF-B5RL03-F1-model_v4 | 34 | 224 | 8 | 207 | 0.5997 |
0.7216 |