PROTEIN: HRGMv2_0320_18_38
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Protein File & Metadata
Source:
HRGMv2_0320_18_38.pdb
Genome ID:
Protein ID:
HRGMv2_0320_18_38
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Protein Sequence
MNKLVWRLLR QHISVGQLAG FFLANLFGMT IVLLSIQFYR DVLPLFTQGD SFMKKEYIIA 60 TKKISTLGSF AGRSNTFTKE EIKELQQQPF TRSIGAFTPS LFKVSAGLGM QEAGIHLSTE 120 MFFESVPDEY VDVNLDKWHF DENSRTIPII IPRNYLNLYN FGFAQSRSLP KLSEGVMSLI 180 RMDIILRGNG RVEQYKGNIV GFSNRLNTIL VPQSFMNWAN QTFAPDQEAQ PSRLIVEVNN 240 PTDTAIADYF QQKNYETEGN NLDAGKTTYF LRLITGIVIS IGLFISLLSF YILMLSIFLL 300 LQKNTVKLEN LLLIGYSPTK VALPYDLLTI GLNLIVLLLS AGGVMWIRSY YTDTLQNLFP 360 QLETGSLWPC ILTGSLLFVF VSLVNILSIR KKVNDIWKNG ASK 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I760-F1-model_v4 | 1 | 400 | 5 | 394 | 0.6829 |
0.7267 |
| AF-A0A132P1Z1-F1-model_v4 | 1 | 403 | 3 | 421 | 0.5895 |
0.6328 |
| AF-P9WG19-F1-model_v4 | 1 | 399 | 2 | 297 | 0.5817 |
0.6862 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5794 |
0.6816 |
| AF-K0F5F4-F1-model_v4 | 1 | 396 | 1 | 301 | 0.5698 |
0.6667 |
| AF-P44872-F1-model_v4 | 1 | 403 | 15 | 310 | 0.5685 |
0.687 |
| AF-Q8ZLF0-F1-model_v4 | 1 | 403 | 57 | 351 | 0.5493 |
0.7033 |
| AF-A0A132P270-F1-model_v4 | 1 | 396 | 10 | 297 | 0.5492 |
0.6653 |
| AF-A0A0H3GUD7-F1-model_v4 | 1 | 403 | 57 | 351 | 0.5485 |
0.7024 |
| AF-P0AC30-F1-model_v4 | 1 | 403 | 6 | 352 | 0.5481 |
0.6121 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 400 | 5 | 486 | 0.5195 |
0.5958 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1L2B3I7 | GH2 | 1 | 403 | 19 | 312 | 0.5515 |
0.6687 |
| A0A837AKF4 | CBM50 | 1 | 400 | 5 | 486 | 0.5195 |
0.5958 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8jia-assembly1.cif.gz_D | 1 | 396 | 5 | 295 | 0.5618 |
0.6719 |
| 7v8i-assembly1.cif.gz_E | 1 | 396 | 1 | 400 | 0.5595 |
0.6027 |
| 8tzk-assembly1.cif.gz_C | 1 | 403 | 12 | 304 | 0.5118 |
0.6184 |
| 5lil-assembly1.cif.gz_A | 1 | 400 | 246 | 608 | 0.4922 |
0.6589 |
| 5lj6-assembly1.cif.gz_A | 1 | 400 | 240 | 594 | 0.4791 |
0.648 |
| 5nik-assembly1.cif.gz_J | 1 | 400 | 98 | 624 | 0.4718 |
0.5895 |
| 5lil-assembly1.cif.gz_B | 1 | 400 | 247 | 597 | 0.4697 |
0.6429 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P9WG19-F1-model_v4 | 1 | 399 | 2 | 297 | 0.5817 |
0.6862 |
| AF-P9WG18-F1-model_v4 | 1 | 399 | 2 | 297 | 0.5814 |
0.6856 |
| AF-Q7TX91-F1-model_v4 | 1 | 399 | 2 | 297 | 0.5794 |
0.6837 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5794 |
0.6816 |
| AF-A5U7B6-F1-model_v4 | 1 | 399 | 2 | 297 | 0.5783 |
0.6833 |
| AF-O35005-F1-model_v4 | 1 | 401 | 5 | 428 | 0.5781 |
0.6316 |
| AF-Q81X30-F1-model_v4 | 1 | 399 | 8 | 297 | 0.572 |
0.6924 |
| AF-O34876-F1-model_v4 | 1 | 399 | 7 | 296 | 0.5719 |
0.6873 |
| AF-P44872-F1-model_v4 | 1 | 403 | 15 | 310 | 0.5685 |
0.687 |
| AF-P0AC32-F1-model_v4 | 1 | 403 | 58 | 352 | 0.5481 |
0.7037 |