PROTEIN: HRGMv2_0308_20_27
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Protein File & Metadata
Source:
HRGMv2_0308_20_27.pdb
Genome ID:
Protein ID:
HRGMv2_0308_20_27
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Protein Sequence
MKPLLSIIIL LTASLAAYSA EHRFYADEGA GDDFSPQDVV CTIHTSIDGD VENVRVTIKN 60 NRHTPFQPVK AGILLGIDTY MDRYPDWNDK YFPTLMVCEP CHFYGYMQSP SGKIKAIASP 120 DPVASWSLDY NLGYQDPAPH WFMGHRIKSL RLDLLAALPL PAHHPGNQWQ LMPGEERSWT 180 IKIIDIPALA DFEATVSREC DVPMLHMETT STAPGNEIQF DIYGSAPSVT VNRQPVPVKK 240 SDIGWQACFS SSTPGIYDIE VIDGNKKAHG HINVRYPWRR TMELAREAAW RYKQKATSHV 300 ESWYGFHTAF LAARYFPCDS IDSLLNKRFD TIFNELFDAV GNQKKYDWRI QNVSSTVGML 360 VDRYEAYSDK ADLMKARLLA DRFISSFQQK DGAYRTGNTV YTSVIYPAKS ILELADAEWE 420 AGLRNDARRH ERSARMAIDR LVESKGDFET EGEITYEDGM VSCSALQIGM LALRQKDNRL 480 RRHYTDEMLE ILKGHDCLTQ LRVPDGRRRG GTMRYWEAQY DVHMLPNMIS SPHGWSAWRA 540 YATYYAYLLT GNERWIKETF DAASSFASLI DPSSGRLSWA FVVDPQLHVR QIAVPDSAHT 600 SETPSYGTPH PDVYGNRKFT IGEQYVDMIS DWQTVVSSDN DVHEVFKFIA EAVLDKAYVV 660 ERPDGSLGCY NCKAVRNGNN IEVYASEPQI CHLFVNTKDK YNVKFDGEII WQ 712
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A175WG55-F1-model_v4 | 6 | 712 | 23 | 894 | 0.6718 |
0.762 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 8 | 687 | 10 | 629 | 0.7551 |
0.8226 |
| AF-A0A516PYA3-F1-model_v4 | PL27 | 8 | 711 | 1 | 640 | 0.7516 |
0.8022 |
| A0A416I060 | PL27 | 5 | 688 | 2 | 651 | 0.7454 |
0.7903 |
| AF-E0S376-F1-model_v4 | PL27 | 9 | 691 | 1 | 593 | 0.7454 |
0.8223 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 11 | 694 | 1 | 619 | 0.7403 |
0.8017 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 7 | 671 | 13 | 663 | 0.7395 |
0.7902 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 17 | 672 | 9 | 643 | 0.7376 |
0.7952 |
| A0A975CYI3 | PL27 | 8 | 653 | 9 | 598 | 0.7374 |
0.8214 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 4 | 692 | 24 | 716 | 0.7351 |
0.7722 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 18 | 686 | 9 | 655 | 0.734 |
0.7844 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A5P8M7F3 | PL27 | 8 | 687 | 10 | 629 | 0.7551 |
0.8226 |
| A0A516PYA3 | PL27 | 8 | 711 | 1 | 640 | 0.7516 |
0.8022 |
| E0S376 | PL27 | 9 | 691 | 1 | 593 | 0.7454 |
0.8223 |
| A0A416I060 | PL27 | 5 | 688 | 2 | 651 | 0.7454 |
0.7903 |
| F5Y9B7 | PL27 | 11 | 694 | 1 | 619 | 0.7403 |
0.8017 |
| A0A2S0KVT5 | PL27 | 7 | 671 | 13 | 663 | 0.7395 |
0.7902 |
| A0A975CYI3 | PL27 | 8 | 653 | 9 | 598 | 0.7374 |
0.8214 |
| A0A6I5ZZU4 | PL27 | 4 | 692 | 24 | 716 | 0.7351 |
0.7722 |
| E3QS34 | PL27 | 9 | 711 | 2 | 702 | 0.7309 |
0.7485 |
| A0A174T7R5 | PL27 | 7 | 672 | 35 | 690 | 0.7292 |
0.7876 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 7 | 656 | 10 | 669 | 0.7314 |
0.7864 |
| 5nok-assembly1.cif.gz_A | 7 | 656 | 14 | 668 | 0.7249 |
0.7788 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.