PROTEIN: HRGMv2_0308_14_25
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Protein File & Metadata
Source:
HRGMv2_0308_14_25.pdb
Genome ID:
Protein ID:
HRGMv2_0308_14_25
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Protein Sequence
MMIRKLTLSL VLLAASSAAY SAGDGYKPAH RFYSVESRND STARGIEYTI ETMRSGNTEI 60 ITLNLRNTRH TPYQPLKAGL KLGIDTYMDS YPEWYGKFFP TLAVCEPDHF YGYMQSPEGK 120 VKAVVSADPI ASWSLDYNMG YPDWTQENRW FYGHRIECLN LDMLCRGPLP DHNPLLWKLE 180 PGERRSWTVK IIDLDAPDSF EEVVYRNTGA PVLLMERTSC SPGDSLEIKV WGSAPRMTVD 240 GNVMDLQKVD DSLWRGIYRA TDPGVKYISV CDGDRQAHGT VAVRYPWNTT MRLAREAVVR 300 YSQKPTSHVE SWYGFHTAFD AARIMPEPGI DSVINRRFDM VVDKIFDCEK GTPYKFHWRI 360 QNVSSTIGML ADRYLAFGNP ADLDLGERMA RYVMDCQRED GAYMNGHTDY TSVIYPAKSM 420 LEFADAERVA GRKKQAARIE ASARRAIDHL AAAHGDLETE GQITYEDGMI SCSALQLGEL 480 ALRSRNAKDR RRYTEAMLRL LDGHDCLTQL RVPDGRRRGG TLRFWEAQYD VFMLPNMISS 540 PHGWSAWRAY ATYYAYLLTG QERWLRETFD AAAAFAALID HKTGDLNWAF VVDPYVDALQ 600 VCEPDTRFTA DDDTYGNPHP ELYPNRKIIV GEQYVPMIAD WQTIVSSDND VHECFKFIAE 660 AVLCNAFVVE RPDGSFGTYN CRLVREGDDL RVTADEAQIR NLHVNLIHPR KVVFDGKVTS 720 DQAPVAER 728
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A516PYA3-F1-model_v4 | PL27 | 17 | 727 | 1 | 640 | 0.7433 |
0.8013 |
| AF-A0A5P8M7F3-F1-model_v4 | PL27 | 18 | 696 | 9 | 629 | 0.7416 |
0.815 |
| AF-E0S376-F1-model_v4 | PL27 | 18 | 700 | 1 | 593 | 0.7339 |
0.8177 |
| A0A416I060 | PL27 | 15 | 697 | 2 | 651 | 0.7318 |
0.7844 |
| AF-A0A2S0KVT5-F1-model_v4 | PL27 | 17 | 680 | 13 | 663 | 0.7282 |
0.786 |
| AF-F5Y9B7-F1-model_v4 | PL27 | 18 | 728 | 13 | 619 | 0.7281 |
0.8112 |
| A0A975CYI3 | PL27 | 17 | 662 | 9 | 598 | 0.7274 |
0.8181 |
| AF-A0A6G7YBN3-F1-model_v4 | PL27 | 26 | 680 | 20 | 643 | 0.7241 |
0.8017 |
| AF-B7GMZ3-F1-model_v4 | PL27 | 26 | 681 | 20 | 655 | 0.7221 |
0.7922 |
| AF-A0A6I5ZZU4-F1-model_v4 | PL27 | 14 | 701 | 25 | 716 | 0.7187 |
0.764 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A516PYA3 | PL27 | 17 | 727 | 1 | 640 | 0.7433 |
0.8013 |
| A0A5P8M7F3 | PL27 | 18 | 696 | 9 | 629 | 0.7416 |
0.815 |
| E0S376 | PL27 | 18 | 700 | 1 | 593 | 0.7339 |
0.8177 |
| A0A416I060 | PL27 | 15 | 697 | 2 | 651 | 0.7318 |
0.7844 |
| A0A2S0KVT5 | PL27 | 17 | 680 | 13 | 663 | 0.7282 |
0.786 |
| F5Y9B7 | PL27 | 18 | 728 | 13 | 619 | 0.7281 |
0.8112 |
| A0A975CYI3 | PL27 | 17 | 662 | 9 | 598 | 0.7274 |
0.8181 |
| A0A6I5ZZU4 | PL27 | 14 | 701 | 25 | 716 | 0.7187 |
0.764 |
| E3QS34 | PL27 | 18 | 727 | 3 | 702 | 0.7185 |
0.7447 |
| A0A174T7R5 | PL27 | 17 | 667 | 35 | 690 | 0.715 |
0.7863 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nok-assembly2.cif.gz_B | 17 | 665 | 10 | 669 | 0.719 |
0.7821 |
| 5nok-assembly1.cif.gz_A | 17 | 665 | 14 | 668 | 0.7124 |
0.7744 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.