dbCAN Logo

PROTEIN: HRGMv2_0307_1_6

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0307_1_6.pdb
Genome ID:
HRGMv2_0307
Protein ID:
HRGMv2_0307_1_6

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MRFTGVCILS   LILSGCVSRT   PESLVPDRPS   NAPDYLCTWN   LQGYVTSYVS   NEMMRYAMNE 60
ENIFGDGEYR   GWASLYEPIR   SDLYFVMDDS   WDIPQDENRA   GDNPCLGTVE   LNEERFPSFK 120
GTPAERLRSL   TRRLKRMGWK   GAGGWICAQK   PESFADVPEE   EYWSARLKEA   AEAGFSYWKV 180
DWGRDATNDA   WRQMLTRLGK   EYAPELWIEH   AMKNEYVVFS   DAFRTYDVEN   VIAQPVTIQR 240
VANLLPYKAQ   AGARGIVNCE   DEPYIAVGLG   CAIGVMRHPF   AGNLPDGRQD   DAFPPVGHNY 300
KRCIDEVVRG   VRWHRIAEPF   AVDGDCMVDT   VRLTDSWELH   ENETWNKGRQ   VGSVLRESAP 360
ARVSRRMPLP   EVADTTSSRP   FVLASRYPND   AVAVAAIGRA   VGREYVRRAV   AVTVEGSDWT 420
APVGLFGRFD   EVTIVYPDAI   DPSVEFEIWG   QDLAGETPVN   ITSAVSVNAN   RLTVPGEVID 480
RVGLMCATEG   DLSDPGMVLK   VRIVR 505
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F1Q5G5-F1-model_v4 29 502 26 409 0.5792 0.6928
AF-A0A077Z3S2-F1-model_v4 29 502 27 413 0.5787 0.6903
AF-G4VLE3-F1-model_v4 29 505 2 395 0.5783 0.6765
AF-A0A0K0ENI1-F1-model_v4 29 505 24 412 0.5752 0.6872
AF-A0A3P7DCV5-F1-model_v4 29 504 38 426 0.5725 0.6899
AF-P51569-F1-model_v4 29 501 37 419 0.5717 0.6929
AF-A0A0N4URH1-F1-model_v4 29 502 24 398 0.5712 0.6889
AF-D3ZJF9-F1-model_v4 29 501 39 420 0.5712 0.6947
AF-A0A5K4F165-F1-model_v4 29 505 27 421 0.5708 0.6771
AF-A0A5K4F2K9-F1-model_v4 29 505 27 421 0.5695 0.6755
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-F4A340-F1-model_v4 GH27 30 505 4 377 0.5933 0.699
AF-E6UHL9-F1-model_v4 GH27 29 503 6 384 0.5915 0.695
AF-A0A0U3RG35-F1-model_v4 GH27 29 505 12 445 0.5888 0.657
AF-A0A1D9PSX7-F1-model_v4 GH27 34 505 1 380 0.5861 0.687
AF-A0A089KI24-F1-model_v4 GH27 29 503 7 386 0.5853 0.6874
AF-A0A089KUL0-F1-model_v4 GH27 30 502 8 386 0.5853 0.6887
AF-A0A7M1TAB8-F1-model_v4 GH27 34 505 1 438 0.5848 0.643
AF-A0A7M2A3Y9-F1-model_v4 GH27 30 503 9 387 0.5848 0.6899
AF-A0A089MAA4-F1-model_v4 GH27 30 503 8 386 0.5843 0.6879
AF-A0A1L5LKI7-F1-model_v4 GH27 30 503 9 387 0.5838 0.6882
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
WAQ99444.1 GH27 34 505 1 370 0.5879 0.7008
WED63026.1 GH27 29 505 26 402 0.5809 0.6999
UJR14853.1 GH27 29 505 32 419 0.5781 0.6954
A0A140EH88 GH27 29 505 13 389 0.5774 0.6851
A0A412ZLA7 GH27 29 503 26 394 0.577 0.7009
O93816 GH27 29 503 27 396 0.5766 0.7014
I0ICN7 GH27 29 501 10 437 0.5747 0.6433
H8KQH3 GH27 29 505 29 396 0.5729 0.7002
A0A0M4LZT6 GH27 29 505 41 405 0.5729 0.7139
A0A5B8MYN7 GH27 27 503 22 419 0.5726 0.6715
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1uas-assembly1.cif.gz_A 29 502 6 362 0.604 0.7255
3igu-assembly1.cif.gz_B 29 503 6 387 0.5961 0.6978
3tv8-assembly1.cif.gz_A 29 503 6 390 0.5933 0.6927
3gxn-assembly1.cif.gz_A 29 503 6 390 0.5925 0.6918
3lx9-assembly1.cif.gz_B 29 503 6 390 0.5915 0.691
3a5v-assembly1.cif.gz_A 29 502 6 393 0.5705 0.667
4nzj-assembly1.cif.gz_A 20 503 8 468 0.5408 0.5845
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P51569-F1-model_v4 29 501 37 419 0.5717 0.6929
AF-Q9FXT4-F1-model_v4 29 502 61 417 0.5627 0.7225
AF-B3PGJ1-F1-model_v4 29 502 30 404 0.5617 0.6814
Download Full SwissProt Results