Genome Details
Selected Rep_genome_ID: HRGMv2_0307
Total Genomes Found: 1
Total Genomes Found: 1
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| HRGMv2_0307 | 2,352,473 | 90.69% | 2.088% | UK | Europe | HRGM |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| HRGMv2_0307_CGC18 | CGCFAM_00113 | Yes | 4 | 2 | |
| HRGMv2_0307_CGC7 | CGCFAM_00511 | Yes | 6 | 1 | |
| HRGMv2_0307_CGC9 | CGCFAM_02407 | Yes | 3 | 1 | |
| HRGMv2_0307_CGC13 | CGCFAM_02408 | Yes | 5 | 1 | |
| HRGMv2_0307_CGC19 | CGCFAM_02410 | Yes | 3 | 1 | |
| HRGMv2_0307_CGC8 | CGCFAM_03094 | Yes | 5 | 1 | |
| HRGMv2_0307_CGC2 | CGCFAM_04390 | Yes | 7 | 1 | |
| HRGMv2_0307_CGC16 | CGCFAM_04393 | Yes | 3 | 1 | |
| HRGMv2_0307_CGC4 | CGCFAM_04492 | Yes | 3 | 1 | |
| HRGMv2_0307_CGC15 | CGCFAM_06734 | Yes | 4 | 1 | |
| HRGMv2_0307_CGC22 | CGCFAM_08990 | Yes | 3 | 1 |
Top CAZyme Families