PROTEIN: HRGMv2_0297_11_50
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Protein File & Metadata
Source:
HRGMv2_0297_11_50.pdb
Genome ID:
Protein ID:
HRGMv2_0297_11_50
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Protein Sequence
MNGKLYIVSA PRFIFDGLTP DKQQRIVYLP DFLSFPKTRI KQLTRALLVG RIRLPKTILY 60 TWFEKTYLDR MLQAKAGDAI LIYEGCNVNV LKAIRSLLPA GVRCYIYYCN PIHTTFKNPS 120 KDLKAIRQLG YELSTFDPQD AEQYDITFTN QYFRYPSEKL PEQVTSDCFF CGLAKNRMEE 180 LQTLKELLEN KGLKCNFIIP NTAKEGISYP EYLRQLSLSR CVIDINQANQ VGLTRRPVEA 240 LFYNKKLITN NTDIRRYDFY NPKNIFIFGK NSLEGIKEFV ESPVTEVPEQ IRQRYDINTW 300 IEHYLP 306
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 306 | 1 | 308 | 0.8005 |
0.8311 |
| AF-A0A133CNC9-F1-model_v4 | 1 | 306 | 1 | 279 | 0.7769 |
0.8583 |
| AF-K0EWM5-F1-model_v4 | 3 | 306 | 1 | 334 | 0.7167 |
0.7757 |
| AF-K0EV23-F1-model_v4 | 3 | 306 | 1 | 333 | 0.7125 |
0.7713 |
| AF-P26388-F1-model_v4 | 3 | 306 | 1 | 404 | 0.6481 |
0.7621 |
| AF-P71243-F1-model_v4 | 3 | 306 | 1 | 404 | 0.6384 |
0.7514 |
| AF-K0F1D2-F1-model_v4 | 1 | 306 | 2 | 364 | 0.6133 |
0.6951 |
| AF-C1H349-F1-model_v4 | 1 | 306 | 11 | 462 | 0.5868 |
0.7443 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-L0KXN6-F1-model_v4 | GT4 | 3 | 306 | 1 | 314 | 0.712 |
0.7572 |
| AF-W5Y7D0-F1-model_v4 | GT4 | 1 | 306 | 14 | 392 | 0.685 |
0.7934 |
| AF-Q8RR90-F1-model_v4 | GT4 | 1 | 306 | 17 | 394 | 0.6848 |
0.7944 |
| AF-F2NDG6-F1-model_v4 | GT4 | 1 | 306 | 3 | 353 | 0.6827 |
0.7559 |
| AF-A0A1L3GM23-F1-model_v4 | GT4 | 1 | 306 | 1 | 341 | 0.6821 |
0.7577 |
| A0A2H4NFC1 | GT4 | 1 | 306 | 1 | 342 | 0.6803 |
0.7543 |
| AF-A0A2H4NFC1-F1-model_v4 | GT4 | 1 | 306 | 1 | 342 | 0.6803 |
0.7543 |
| QGZ72378.1 | GT4 | 3 | 306 | 1 | 337 | 0.68 |
0.7454 |
| AF-A0A1C7F9D1-F1-model_v4 | GT4 | 1 | 306 | 5 | 343 | 0.6779 |
0.7506 |
| AF-A0A2S0VM41-F1-model_v4 | GT4 | 1 | 306 | 3 | 332 | 0.6762 |
0.7326 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| L0KXN6 | GT4 | 3 | 306 | 1 | 314 | 0.712 |
0.7572 |
| C7NM40 | GT4 | 3 | 306 | 1 | 307 | 0.6893 |
0.7282 |
| A0A2K8TCG0 | GT4 | 3 | 306 | 1 | 336 | 0.6881 |
0.754 |
| B6GA82 | GT4 | 1 | 306 | 1 | 347 | 0.6866 |
0.7553 |
| A0A346NMW1 | GT4 | 1 | 306 | 2 | 345 | 0.6851 |
0.7519 |
| F2NDG6 | GT4 | 1 | 306 | 3 | 353 | 0.6827 |
0.7559 |
| A0A1L3GM23 | GT4 | 1 | 306 | 1 | 341 | 0.6821 |
0.7577 |
| A0A060RDQ7 | GT4 | 1 | 306 | 1 | 367 | 0.6819 |
0.7707 |
| A0A2H4NFC1 | GT4 | 1 | 306 | 1 | 342 | 0.6803 |
0.7543 |
| QGZ72378.1 | GT4 | 3 | 306 | 1 | 337 | 0.68 |
0.7454 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3qkw-assembly1.cif.gz_A | 1 | 306 | 1 | 324 | 0.685 |
0.7366 |
| 4w6q-assembly1.cif.gz_A | 1 | 306 | 2 | 327 | 0.6849 |
0.7388 |
| 3qkw-assembly1.cif.gz_B | 1 | 306 | 2 | 320 | 0.6818 |
0.7298 |
| 5zes-assembly1.cif.gz_A | 1 | 306 | 1 | 348 | 0.6766 |
0.7474 |
| 5zer-assembly1.cif.gz_B | 1 | 306 | 1 | 341 | 0.6627 |
0.7275 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27126-F1-model_v4 | 3 | 306 | 1 | 308 | 0.8005 |
0.8311 |
| AF-P26388-F1-model_v4 | 3 | 306 | 1 | 404 | 0.6481 |
0.7621 |
| AF-P71243-F1-model_v4 | 3 | 306 | 1 | 404 | 0.6384 |
0.7514 |
| AF-O31681-F1-model_v4 | 3 | 306 | 1 | 325 | 0.6278 |
0.731 |
| AF-O66628-F1-model_v4 | 3 | 306 | 1 | 388 | 0.6186 |
0.724 |