PROTEIN: HRGMv2_0292_4_143
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Protein File & Metadata
Source:
HRGMv2_0292_4_143.pdb
Genome ID:
Protein ID:
HRGMv2_0292_4_143
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Protein Sequence
MAVAAALLMA CTAAGQELLW SVDYSTVLNN REGGDGETPD QTFFFARVSP EIGVGLMNGR 60 HQLKGGVSWY QPINDDWDGY KLHPTLYYTY TRRHWRMAAG AMPRTLLRER LPLYLWSDSM 120 AYRQPNVRGA LVQYTAGSSY WQMALDWRQM QSATRREAFN AIFSGRWHPG RRAAWLGGYL 180 QYNHLAKRKD APADEGVNDD VTVNPLVGID LSRHTALDSL AFSAGAVVQM QRARSEGKWH 240 TPCAFVASAT AQWRWLGITE QVKAGKDLYP LYDRFGSELN MGDPYYRHKF YSRTDIWARI 300 VGTRFADVRT TLSFHTTGDG TFGFWQQVAV RFYIDNAVWS HRRNPKWLQR HKLGNTY 357
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25287-F1-model_v4 | 6 | 345 | 15 | 415 | 0.8059 |
0.92 |
| AF-O25734-F1-model_v4 | 13 | 345 | 22 | 432 | 0.7741 |
0.9193 |
| AF-P43839-F1-model_v4 | 12 | 334 | 24 | 359 | 0.6364 |
0.7229 |
| AF-Q5F5V7-F1-model_v4 | 11 | 333 | 13 | 348 | 0.6296 |
0.7065 |
| AF-P02932-F1-model_v4 | 15 | 333 | 27 | 351 | 0.6126 |
0.6995 |
| AF-A0A0H3GP71-F1-model_v4 | 10 | 333 | 35 | 381 | 0.6115 |
0.7127 |
| AF-P21420-F1-model_v4 | 15 | 332 | 29 | 365 | 0.6075 |
0.7054 |
| AF-P37432-F1-model_v4 | 15 | 332 | 28 | 363 | 0.6067 |
0.702 |
| AF-Q9I202-F1-model_v4 | 1 | 339 | 9 | 409 | 0.6065 |
0.6989 |
| AF-Q9I1Q4-F1-model_v4 | 1 | 339 | 12 | 416 | 0.6035 |
0.7005 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| Q5NNK1 | GH8 | 6 | 357 | 1 | 1309 | 0.3476 |
0.5589 |
| A0A0E1SCH0 | GH8 | 1 | 357 | 104 | 2002 | 0.3441 |
0.5916 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ehe-assembly1.cif.gz_A | 16 | 332 | 1 | 302 | 0.6871 |
0.7619 |
| 5oyk-assembly1.cif.gz_A | 12 | 332 | 5 | 319 | 0.6558 |
0.7185 |
| 6ehf-assembly1.cif.gz_A | 15 | 332 | 1 | 318 | 0.6526 |
0.71 |
| 8bym-assembly1.cif.gz_A | 9 | 334 | 9 | 321 | 0.6509 |
0.7244 |
| 6ehd-assembly1.cif.gz_A | 16 | 332 | 7 | 322 | 0.6496 |
0.7134 |
| 2prn-assembly1.cif.gz_A | 19 | 332 | 1 | 289 | 0.6446 |
0.7318 |
| 1bh3-assembly1.cif.gz_A | 19 | 332 | 1 | 289 | 0.644 |
0.7312 |
| 3wi5-assembly1.cif.gz_A | 18 | 333 | 1 | 312 | 0.6373 |
0.7051 |
| 1pho-assembly1.cif.gz_A | 12 | 332 | 6 | 330 | 0.6335 |
0.6994 |
| 6ehc-assembly1.cif.gz_A | 5 | 332 | 5 | 307 | 0.632 |
0.7068 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39767-F1-model_v4 | 19 | 332 | 1 | 289 | 0.6464 |
0.7335 |
| AF-Q48217-F1-model_v4 | 12 | 333 | 24 | 361 | 0.6424 |
0.7338 |
| AF-Q48221-F1-model_v4 | 12 | 333 | 24 | 353 | 0.6383 |
0.7216 |
| AF-P43839-F1-model_v4 | 12 | 334 | 24 | 359 | 0.6364 |
0.7229 |
| AF-P20149-F1-model_v4 | 12 | 333 | 24 | 361 | 0.635 |
0.7249 |
| AF-Q48216-F1-model_v4 | 11 | 334 | 24 | 360 | 0.6348 |
0.7207 |
| AF-P46027-F1-model_v4 | 11 | 334 | 23 | 371 | 0.6341 |
0.7294 |
| AF-Q9CNN9-F1-model_v4 | 15 | 332 | 26 | 348 | 0.6292 |
0.7128 |
| AF-O54340-F1-model_v4 | 15 | 332 | 26 | 343 | 0.6292 |
0.7087 |
| AF-P46025-F1-model_v4 | 11 | 333 | 24 | 385 | 0.6268 |
0.7338 |