PROTEIN: HRGMv2_0265_30_8
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Protein File & Metadata
Source:
HRGMv2_0265_30_8.pdb
Genome ID:
Protein ID:
HRGMv2_0265_30_8
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Protein Sequence
MPQLHPAKTD IAVLLLFFNR PSTFKLVFEE VKKARPSRLF LYQDGPRGEK DMAGIEACRK 60 IVEDIDWECD VRRNFQTRNY GCDPSGYMAH KWAFSLADKC IVLEDDVVPS QSFFPFCKEM 120 LDRYENDERI TMVAGFNTDE VTSDVPYSYF FTSVFSIWGW ASWRRVIDKW DGDYTFLNDD 180 FNRTQLAHLA KERGVRNDFM QMCYDHKANG KQYFESIFWS TMLMNNGLAI MPTVNQINNV 240 GATADSTHYG ELLTMPKALR RIFTMARLEI DFPLKHPKYV MEYVDYKHRL YRRNAWGHPW 300 VKIARSFEEL FYNLRQANFA YIWKMLTRRI RKLMGIEKHK 340
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A3P7DV18-F1-model_v4 | 1 | 284 | 27 | 301 | 0.6061 |
0.7204 |
| AF-Q4D3G6-F1-model_v4 | 3 | 290 | 56 | 367 | 0.6056 |
0.7617 |
| AF-Q4DMC0-F1-model_v4 | 9 | 290 | 66 | 367 | 0.6054 |
0.7765 |
| AF-A0A044SGH9-F1-model_v4 | 6 | 335 | 11 | 420 | 0.5963 |
0.6925 |
| AF-A0A3P7Q5X9-F1-model_v4 | 8 | 305 | 35 | 337 | 0.5817 |
0.6837 |
| AF-A0A0K0ETJ8-F1-model_v4 | 8 | 335 | 36 | 441 | 0.5759 |
0.6855 |
| AF-A0A0N4UBX8-F1-model_v4 | 25 | 334 | 1 | 385 | 0.5684 |
0.6747 |
| AF-A0A044SYE9-F1-model_v4 | 9 | 306 | 48 | 397 | 0.5661 |
0.7026 |
| AF-G5EBG7-F1-model_v4 | 6 | 335 | 67 | 463 | 0.564 |
0.6819 |
| AF-A0A3P7EF88-F1-model_v4 | 7 | 334 | 105 | 514 | 0.55 |
0.6944 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H1AE61 | GT0 | 3 | 340 | 1 | 341 | 0.9722 |
0.9857 |
| AF-A0A1Q6IVQ8-F1-model_v4 | GT0 | 4 | 340 | 1 | 338 | 0.9552 |
0.9699 |
| AF-A0A6M4M676-F1-model_v4 | GT0 | 4 | 340 | 1 | 338 | 0.9542 |
0.969 |
| AF-A0A076J0N4-F1-model_v4 | GT0 | 4 | 340 | 1 | 338 | 0.9532 |
0.968 |
| AF-A0A0P0LL34-F1-model_v4 | GT0 | 4 | 340 | 1 | 338 | 0.9519 |
0.9668 |
| QWE08948.1 | GT0 | 6 | 316 | 1 | 303 | 0.8483 |
0.9125 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 9 | 338 | 1 | 302 | 0.837 |
0.9088 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 9 | 338 | 1 | 302 | 0.835 |
0.907 |
| AF-A4SVL4-F1-model_v4 | GT0 | 6 | 312 | 1 | 300 | 0.8346 |
0.9047 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 9 | 337 | 1 | 301 | 0.8323 |
0.9066 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 8 | 328 | 4 | 300 | 0.7666 |
0.8487 |
| WBV42548.1 | GT13 | 9 | 335 | 12 | 310 | 0.6463 |
0.7171 |
| A0A380KPF0 | GT2 | 9 | 340 | 1 | 276 | 0.6199 |
0.7093 |
| A0A6G7Y068 | GT2 | 9 | 340 | 2 | 281 | 0.6151 |
0.6958 |
| S5RKF7 | GT2 | 9 | 340 | 5 | 278 | 0.611 |
0.707 |
| QEO42451.1 | GT2 | 10 | 340 | 1 | 285 | 0.6091 |
0.6872 |
| BCN21993.1 | GT2 | 7 | 340 | 1 | 282 | 0.6084 |
0.6871 |
| WED42819.1 | GT2 | 9 | 340 | 2 | 294 | 0.6076 |
0.68 |
| QSJ15284.1 | GT2 | 10 | 335 | 3 | 294 | 0.606 |
0.6862 |
| QJD72829.1 | GT2 | 8 | 340 | 3 | 270 | 0.6036 |
0.706 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 9 | 298 | 1 | 305 | 0.5883 |
0.7011 |
| 1fo8-assembly1.cif.gz_A | 8 | 298 | 1 | 293 | 0.5727 |
0.6686 |
| 5ggi-assembly1.cif.gz_A | 1 | 298 | 6 | 352 | 0.5665 |
0.6998 |
| 1h7q-assembly1.cif.gz_A | 9 | 340 | 1 | 225 | 0.5541 |
0.7041 |
| 1qgs-assembly1.cif.gz_A | 9 | 340 | 1 | 223 | 0.5534 |
0.7057 |
| 1h7l-assembly1.cif.gz_A | 9 | 340 | 1 | 224 | 0.5525 |
0.7032 |
| 5vcr-assembly2.cif.gz_B | 2 | 340 | 23 | 330 | 0.5509 |
0.6226 |
| 5vcr-assembly1.cif.gz_A | 2 | 340 | 23 | 336 | 0.5497 |
0.6162 |
| 5vcs-assembly1.cif.gz_B | 3 | 340 | 21 | 307 | 0.541 |
0.635 |
| 5vcs-assembly1.cif.gz_A | 2 | 340 | 28 | 340 | 0.5401 |
0.6109 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39621-F1-model_v4 | 9 | 340 | 2 | 242 | 0.5591 |
0.6899 |
| AF-P47306-F1-model_v4 | 9 | 336 | 1 | 262 | 0.5508 |
0.676 |
| AF-Q11068-F1-model_v4 | 8 | 306 | 90 | 449 | 0.5411 |
0.7023 |
| AF-Q9XGM8-F1-model_v4 | 4 | 298 | 96 | 406 | 0.5287 |
0.6925 |
| AF-Q09325-F1-model_v4 | 8 | 298 | 105 | 410 | 0.5264 |
0.7 |
| AF-P27115-F1-model_v4 | 8 | 298 | 105 | 410 | 0.5262 |
0.6997 |
| AF-P26572-F1-model_v4 | 8 | 305 | 103 | 402 | 0.5243 |
0.6807 |
| AF-P27808-F1-model_v4 | 8 | 305 | 105 | 403 | 0.5238 |
0.6816 |
| AF-P0DB61-F1-model_v4 | 8 | 340 | 63 | 408 | 0.508 |
0.5876 |
| AF-Q8NKX1-F1-model_v4 | 8 | 340 | 63 | 408 | 0.5073 |
0.5869 |