PROTEIN: HRGMv2_0244_34_11
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Protein File & Metadata
Source:
HRGMv2_0244_34_11.pdb
Genome ID:
Protein ID:
HRGMv2_0244_34_11
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Protein Sequence
MPLKPYKTDV AVLILFFNRP DHLQKVFDEV RKAQPSKLFL YQDGPRGERD MAGIEACRSI 60 VSNIDWDCEV HRKFQERNYG CDPSEYISQK WAFSIVDKCI VLEDDDVPSQ SFFTFCKEML 120 DRYEHDERIG MIAGFNPEEK LDGYPSDYLF TSVFSIWGWA SWRRVIDKWD ASYTFLDDPN 180 AMRQVEDIMR QRQLCRDTLR ACYDHRASGK EYYETIFWAS MLLNSALAIM PTRNLINNLG 240 ATDGSTHYTG SLQTMPRRLR RLFTMKRFEF DAPLRHPRYI IEDVDFKEKV YRTYAYGHPW 300 IKAGRSMEEL WLNLKYGNFG HIARSVANRV AKILGKDKHW 340
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4D3G6-F1-model_v4 | 2 | 290 | 56 | 367 | 0.613 |
0.767 |
| AF-A0A3P7DV18-F1-model_v4 | 2 | 286 | 34 | 303 | 0.6112 |
0.7378 |
| AF-Q4DMC0-F1-model_v4 | 8 | 290 | 66 | 367 | 0.6111 |
0.7806 |
| AF-Q32EF9-F1-model_v4 | 9 | 340 | 4 | 298 | 0.5986 |
0.6693 |
| AF-A0A044SGH9-F1-model_v4 | 5 | 340 | 11 | 419 | 0.5963 |
0.6818 |
| AF-A0A3P7Q5X9-F1-model_v4 | 8 | 305 | 36 | 339 | 0.5889 |
0.6928 |
| AF-A0A0K0ETJ8-F1-model_v4 | 3 | 339 | 22 | 441 | 0.577 |
0.6707 |
| AF-G5EBG7-F1-model_v4 | 5 | 340 | 67 | 463 | 0.5662 |
0.6733 |
| AF-A0A044SYE9-F1-model_v4 | 8 | 298 | 48 | 354 | 0.5606 |
0.7099 |
| AF-A0A3P7EF88-F1-model_v4 | 5 | 339 | 104 | 512 | 0.5506 |
0.6808 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1Q6IVQ8-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9821 |
0.9903 |
| AF-A0A6M4M676-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.981 |
0.9894 |
| AF-A0A0P0LL34-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9801 |
0.9886 |
| AF-A0A076J0N4-F1-model_v4 | GT0 | 3 | 340 | 1 | 338 | 0.9801 |
0.9886 |
| A0A1H1AE61 | GT0 | 2 | 340 | 1 | 341 | 0.9637 |
0.9746 |
| QWE08948.1 | GT0 | 5 | 316 | 1 | 303 | 0.862 |
0.9253 |
| AF-A4SVL4-F1-model_v4 | GT0 | 5 | 312 | 1 | 300 | 0.8507 |
0.92 |
| AF-B2IZQ8-F1-model_v4 | GT0 | 8 | 337 | 1 | 303 | 0.846 |
0.9146 |
| AF-A0A2L2NV30-F1-model_v4 | GT0 | 8 | 338 | 1 | 302 | 0.8447 |
0.916 |
| AF-A0A6P1KTQ9-F1-model_v4 | GT0 | 8 | 338 | 1 | 302 | 0.8433 |
0.9142 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1B1U5H3 | GT13 | 7 | 328 | 4 | 300 | 0.7732 |
0.8559 |
| WBV42548.1 | GT13 | 9 | 339 | 13 | 310 | 0.6482 |
0.7197 |
| A0A380KPF0 | GT2 | 8 | 340 | 1 | 273 | 0.6134 |
0.7084 |
| R5FYV9 | GT2 | 1 | 318 | 41 | 589 | 0.6129 |
0.8352 |
| A0A6G7Y068 | GT2 | 8 | 340 | 2 | 278 | 0.6091 |
0.6952 |
| UQZ80977.1 | GT2 | 8 | 255 | 6 | 229 | 0.6021 |
0.7484 |
| BCN21993.1 | GT2 | 6 | 340 | 1 | 281 | 0.6016 |
0.6814 |
| WED42819.1 | GT2 | 8 | 340 | 2 | 294 | 0.6016 |
0.6741 |
| AUC25089.1 | GT2 | 8 | 340 | 5 | 277 | 0.6009 |
0.694 |
| A0A9E9LT15 | GT2 | 5 | 315 | 1 | 272 | 0.6 |
0.6832 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2apc-assembly1.cif.gz_A | 8 | 298 | 1 | 305 | 0.5929 |
0.7036 |
| 1fo8-assembly1.cif.gz_A | 7 | 298 | 1 | 293 | 0.574 |
0.6671 |
| 5ggi-assembly1.cif.gz_A | 1 | 298 | 6 | 352 | 0.568 |
0.7027 |
| 1h7q-assembly1.cif.gz_A | 8 | 297 | 1 | 232 | 0.5484 |
0.6783 |
| 1qgs-assembly1.cif.gz_A | 8 | 297 | 1 | 230 | 0.5483 |
0.6804 |
| 1h7l-assembly1.cif.gz_A | 8 | 297 | 1 | 231 | 0.5481 |
0.6788 |
| 5vcm-assembly1.cif.gz_A | 2 | 340 | 21 | 334 | 0.5479 |
0.6139 |
| 5vcm-assembly2.cif.gz_B | 1 | 340 | 29 | 344 | 0.5437 |
0.6114 |
| 5vcs-assembly1.cif.gz_A | 2 | 340 | 28 | 339 | 0.5381 |
0.6092 |
| 8f73-assembly2.cif.gz_D-4 | 8 | 266 | 1 | 264 | 0.5025 |
0.5992 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39621-F1-model_v4 | 8 | 340 | 2 | 242 | 0.5611 |
0.6922 |
| AF-P47306-F1-model_v4 | 8 | 339 | 1 | 262 | 0.553 |
0.6787 |
| AF-Q11068-F1-model_v4 | 8 | 309 | 91 | 449 | 0.5447 |
0.7024 |
| AF-P75042-F1-model_v4 | 8 | 339 | 1 | 261 | 0.5412 |
0.6692 |
| AF-Q9XGM8-F1-model_v4 | 2 | 305 | 95 | 400 | 0.5323 |
0.6784 |
| AF-P27115-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5318 |
0.705 |
| AF-Q09325-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5312 |
0.7036 |
| AF-P27808-F1-model_v4 | 7 | 298 | 105 | 410 | 0.5307 |
0.7035 |
| AF-P26572-F1-model_v4 | 7 | 305 | 103 | 401 | 0.5295 |
0.6863 |
| AF-P42407-F1-model_v4 | 8 | 265 | 1 | 263 | 0.4978 |
0.5952 |