PROTEIN: HRGMv2_0244_18_11
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0244_18_11.pdb
Genome ID:
Protein ID:
HRGMv2_0244_18_11
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MFFVDQKYFV FVDEASGDAT GKLNLHYLLT DGDTNMDAAN GIIRTNYKPD SNVMIQCFGS 60 QKLDLTQQEG FYSLAYRKKT ARPNFVFSTD KKDAQTVRFV TVIFPDKEVG SVKAYAKIVS 120 ASDKAMKVEV EINGAKKILE WNL 143
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D4IIT1-F1-model_v4 | PL12_2 | 1 | 140 | 157 | 289 | 0.648 |
0.943 |
| AF-E6SWR7-F1-model_v4 | PL12_2 | 1 | 143 | 520 | 665 | 0.5716 |
0.9542 |
| AF-A0A0P0G9R4-F1-model_v4 | PL12_2 | 1 | 143 | 520 | 665 | 0.5714 |
0.9541 |
| AF-A0A2R3MNA3-F1-model_v4 | PL12_2 | 1 | 143 | 520 | 665 | 0.5707 |
0.9529 |
| AF-F0S8N8-F1-model_v4 | PL12_2 | 1 | 143 | 509 | 652 | 0.5689 |
0.9482 |
| AF-Q89YS4-F1-model_v4 | PL12_2 | 1 | 143 | 521 | 666 | 0.5659 |
0.9463 |
| AF-C7EXL6-F1-model_v4 | PL12_2 | 1 | 143 | 521 | 666 | 0.5657 |
0.9458 |
| AF-Q89YR9-F1-model_v4 | PL12_2 | 1 | 143 | 553 | 702 | 0.5642 |
0.9526 |
| AF-C6IQ17-F1-model_v4 | PL12_2 | 1 | 143 | 553 | 702 | 0.5637 |
0.9519 |
| AF-A0A1H6KDF3-F1-model_v4 | PL12_2 | 1 | 143 | 519 | 664 | 0.5628 |
0.9413 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| F0S8N8 | PL12_2 | 1 | 143 | 509 | 652 | 0.5689 |
0.9482 |
| A0A7G1I015 | PL12_2 | 1 | 143 | 526 | 672 | 0.5627 |
0.9432 |
| B0NW19 | PL12_2 | 1 | 143 | 557 | 704 | 0.5586 |
0.945 |
| A0A5M5BP38 | PL12_2 | 1 | 143 | 540 | 696 | 0.5488 |
0.9279 |
| A0A1X9Z580 | PL12_2 | 1 | 143 | 513 | 659 | 0.5455 |
0.9143 |
| A0A6I6JQT6 | PL12 | 1 | 143 | 517 | 659 | 0.5424 |
0.9082 |
| A0A1H4FM77 | PL12_2 , PL12 | 1 | 143 | 823 | 970 | 0.5252 |
0.9349 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4fnv-assembly1.cif.gz_A | 1 | 143 | 510 | 659 | 0.5722 |
0.9552 |
| 5jmf-assembly1.cif.gz_A | 1 | 143 | 493 | 638 | 0.5631 |
0.9352 |
| 5jmd-assembly1.cif.gz_A | 1 | 143 | 501 | 646 | 0.5626 |
0.9364 |
| 4mmi-assembly1.cif.gz_A | 1 | 143 | 486 | 634 | 0.5477 |
0.9123 |
| 4mmh-assembly1.cif.gz_A | 1 | 143 | 486 | 634 | 0.5451 |
0.9087 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-C7EXL6-F1-model_v4 | 1 | 143 | 521 | 666 | 0.5659 |
0.9463 |
| AF-Q89YR9-F1-model_v4 | 1 | 143 | 553 | 702 | 0.5645 |
0.9531 |