PROTEIN: HRGMv2_0243_28_15
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Protein File & Metadata
Source:
HRGMv2_0243_28_15.pdb
Genome ID:
Protein ID:
HRGMv2_0243_28_15
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Protein Sequence
MSLIEIRKVE NKKDLKTFID FHYDLYEGNE YDVPNLFSDE MNTLSKDRNA AFEFCESEYF 60 LAYKDGKLAG RVAAIINHKA NERWNCKSVR FGWIDFIDDR EVSKALLQAV EDYGKSKGMD 120 NVVGPLGFTD MDPEGMLTWG FDQLGTMPTI YNYSYYPEHI EALDGYEVDN KYVEYKLIVP 180 DTVPEKYAKI AAMIEKRYNL HVRKLTKKDV FQGGYGQKIF ELINATYKDL YGYSELSQKQ 240 IDQLIHSYLS FLDFNLITCI EDWSEAEHKM VGIGITIPSL AKALQKCRRG RLFPFGWWHV 300 LRAIKMHKTK IVDLLLVGVL PEYRAKGANA LLFADLIPRY QAYGIEWGET QVEMEANAGV 360 QGQWGVLNPI LHKRRNCYKK IIK 383
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8995 |
0.9363 |
| AF-X8EWX4-F1-model_v4 | 1 | 382 | 17 | 393 | 0.8966 |
0.9343 |
| AF-P9WJM7-F1-model_v4 | 3 | 383 | 1 | 313 | 0.7235 |
0.8163 |
| AF-Q9CBC9-F1-model_v4 | 4 | 383 | 1 | 309 | 0.7118 |
0.8089 |
| AF-K0EMI4-F1-model_v4 | 1 | 383 | 11 | 315 | 0.7021 |
0.8153 |
| AF-Q54DW0-F1-model_v4 | 3 | 383 | 1 | 321 | 0.6582 |
0.7393 |
| AF-K0EYT8-F1-model_v4 | 1 | 381 | 9 | 259 | 0.6291 |
0.7874 |
| AF-A0A1D8PMF7-F1-model_v4 | 1 | 383 | 8 | 389 | 0.6085 |
0.6545 |
| AF-Q9NAR1-F1-model_v4 | 1 | 381 | 26 | 332 | 0.6049 |
0.7363 |
| AF-K0EUT6-F1-model_v4 | 1 | 383 | 14 | 316 | 0.6041 |
0.7101 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 382 | 15 | 339 | 0.7491 |
0.8441 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 383 | 410 | 740 | 0.4948 |
0.7473 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 383 | 583 | 968 | 0.4831 |
0.6976 |
| AF-A0A384J7C8-F1-model_v4 | GH3 | 1 | 383 | 583 | 956 | 0.481 |
0.7068 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4793 |
0.7709 |
| AF-G2XQQ8-F1-model_v4 | GH3 | 1 | 383 | 606 | 980 | 0.4786 |
0.7057 |
| UPL03096.1 | GH3 | 1 | 383 | 248 | 966 | 0.4784 |
0.69 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 383 | 72 | 834 | 0.4756 |
0.6569 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 382 | 104 | 859 | 0.4746 |
0.6625 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 382 | 104 | 859 | 0.4733 |
0.6606 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 382 | 15 | 339 | 0.7491 |
0.8441 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4793 |
0.7709 |
| UPL03096.1 | GH3 | 1 | 383 | 248 | 966 | 0.4784 |
0.69 |
| A0A7U2MF49 | GH3 | 1 | 383 | 72 | 834 | 0.4756 |
0.6569 |
| V9M3A9 | GH3 | 1 | 380 | 536 | 858 | 0.4678 |
0.7562 |
| A0A7H8QUW2 | GH3 | 1 | 383 | 209 | 947 | 0.4638 |
0.6649 |
| E5A892 | GH3 | 1 | 383 | 535 | 883 | 0.4636 |
0.7065 |
| A0A161HFD8 | GH3 | 1 | 383 | 570 | 968 | 0.4633 |
0.6683 |
| Q6MFP1 | GH3 | 1 | 383 | 580 | 1082 | 0.4627 |
0.6873 |
| G1XST4 | GH3 | 1 | 383 | 606 | 1002 | 0.4582 |
0.6673 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7q3a-assembly1.cif.gz_A | 1 | 382 | 18 | 339 | 0.7258 |
0.8266 |
| 7q3a-assembly2.cif.gz_B | 1 | 382 | 17 | 340 | 0.7241 |
0.8217 |
| 5kgh-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.7235 |
0.8124 |
| 2c27-assembly1.cif.gz_A | 7 | 381 | 1 | 301 | 0.7233 |
0.8269 |
| 5kga-assembly1.cif.gz_B | 4 | 383 | 1 | 316 | 0.7223 |
0.8106 |
| 5kf2-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.7223 |
0.8119 |
| 5kgh-assembly1.cif.gz_B | 4 | 383 | 1 | 313 | 0.721 |
0.8124 |
| 5kf1-assembly1.cif.gz_B | 4 | 383 | 1 | 312 | 0.7186 |
0.811 |
| 1p0h-assembly1.cif.gz_A | 4 | 380 | 1 | 290 | 0.7027 |
0.8183 |
| 2wpw-assembly4.cif.gz_D | 3 | 383 | 1 | 322 | 0.6769 |
0.7603 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8995 |
0.9363 |
| AF-D3Q4A8-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7583 |
0.8592 |
| AF-Q5EDG0-F1-model_v4 | 3 | 380 | 1 | 301 | 0.7454 |
0.8512 |
| AF-C6WPR7-F1-model_v4 | 3 | 380 | 1 | 297 | 0.7431 |
0.8539 |
| AF-B0RAV5-F1-model_v4 | 1 | 381 | 9 | 304 | 0.7428 |
0.8646 |
| AF-D1A4F4-F1-model_v4 | 1 | 383 | 1 | 297 | 0.7425 |
0.8527 |
| AF-A6W6C7-F1-model_v4 | 1 | 383 | 3 | 303 | 0.742 |
0.8503 |
| AF-A5CTZ8-F1-model_v4 | 1 | 381 | 11 | 306 | 0.7412 |
0.8654 |
| AF-C7QKH8-F1-model_v4 | 1 | 380 | 1 | 314 | 0.7412 |
0.8325 |
| AF-C7MRC4-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7404 |
0.8396 |