PROTEIN: HRGMv2_0223_41_25
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Protein File & Metadata
Source:
HRGMv2_0223_41_25.pdb
Genome ID:
Protein ID:
HRGMv2_0223_41_25
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Protein Sequence
MSIVLLSILS MLSAFMQYVR NDYQSLDNQY AVFKGEHTGA ADERGVRTNA DLSMVAAFMG 60 EDSIALKTLA FAVHTHKAVR KRPCLDGRYW GSVSAKDHQW ESSLWAMSVA YSAYFQWQRL 120 PDSMKTDIYH LLKAECNYEL ERDIPTGYIG DTKAEENGWE VDVLAATLGL FPDDPLASQW 180 FQRMRAFAIN SYSHPTDAQD PTVIDPDYDA TRVCDLYKGP NLYPDWTLQN HDFFHTSYQN 240 VVIQELGEAA LALRLFQGKR QRWASRALLH NCDKVTENVL NWLTLPDGEQ AMPNGNDWSL 300 FLYDQVTSYA TMACMQRNAD ALYFERQCLK RIAQRQQTTD DGSFLLRPDV GARRMGVQAH 360 RLLMTELMHR LWPTEDMSPT RWTDFERRYH GSKLFPCQQI VRTLTPRCFA CFSFSKGKKS 420 YTGYFAPIHD DMTDNLVIPY RQYNTGNIIG YYQPTTGKPN ARLVGEPTID IKGDYFIVKA 480 TLAENDGSIV RRFTLRSRAD GLEYSDNVKM KTADRLKDYT GLLAISTDEF TGRNHQVDFQ 540 PGLTRIDNQL TVQSDSRVKA QWTKETIDNS VRSKRLAPYV AGKPQTRHHI IYRID 595
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 595 | 16 | 600 | 0.6748 |
0.7239 |
| AF-U7PW17-F1-model_v4 | 1 | 595 | 11 | 690 | 0.6577 |
0.7363 |
| AF-Q5RGL8-F1-model_v4 | 1 | 595 | 61 | 670 | 0.5393 |
0.6685 |
| AF-Q9UL01-F1-model_v4 | 1 | 595 | 58 | 669 | 0.5307 |
0.6599 |
| AF-Q8BLI4-F1-model_v4 | 1 | 595 | 58 | 669 | 0.5286 |
0.6573 |
| AF-B5DF19-F1-model_v4 | 1 | 595 | 58 | 669 | 0.525 |
0.6527 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.7535 |
0.7779 |
| AF-A0A2Z4IP26-F1-model_v4 | PL37 | 1 | 595 | 35 | 638 | 0.7353 |
0.7751 |
| AF-A0A2I7SK51-F1-model_v4 | PL37 | 1 | 595 | 35 | 638 | 0.7327 |
0.7725 |
| AF-A0A7D4Q3L2-F1-model_v4 | PL37 | 1 | 595 | 37 | 636 | 0.7324 |
0.7701 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7323 |
0.7739 |
| AF-A0A1U7DSZ0-F1-model_v4 | PL37 | 1 | 595 | 34 | 638 | 0.7313 |
0.771 |
| AF-A0A3Q9FIR8-F1-model_v4 | PL37 | 1 | 595 | 37 | 636 | 0.7294 |
0.7683 |
| AF-A0A1B1Y531-F1-model_v4 | PL37 | 1 | 595 | 36 | 635 | 0.7277 |
0.7663 |
| AF-A0A1U7DU03-F1-model_v4 | PL37 | 1 | 595 | 37 | 636 | 0.7274 |
0.7664 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7239 |
0.7669 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.7535 |
0.7779 |
| A0A7G8UMI7 | PL37 | 3 | 595 | 1 | 597 | 0.748 |
0.7678 |
| C6XTA3 | PL37 | 1 | 595 | 25 | 634 | 0.7365 |
0.7738 |
| C6Y378 | PL37 | 1 | 595 | 26 | 627 | 0.7346 |
0.7684 |
| A0A3B7MN57 | PL37 | 1 | 595 | 37 | 638 | 0.7343 |
0.7741 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7323 |
0.7739 |
| A0A415S2E7 | PL37 | 1 | 595 | 28 | 633 | 0.7305 |
0.7671 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7239 |
0.7669 |
| A0A518HT83 | PL37 | 1 | 595 | 43 | 654 | 0.7205 |
0.7694 |
| A0A975BDI7 | PL37 | 59 | 595 | 1 | 536 | 0.7081 |
0.7626 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1lxk-assembly1.cif.gz_A | 1 | 595 | 20 | 630 | 0.6493 |
0.7224 |
| 1ojo-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6476 |
0.7219 |
| 1n7o-assembly1.cif.gz_A | 1 | 595 | 21 | 632 | 0.6467 |
0.7207 |
| 1n7p-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6464 |
0.7203 |
| 1n7n-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.646 |
0.7198 |
| 2brp-assembly1.cif.gz_A | 1 | 595 | 22 | 631 | 0.6457 |
0.7195 |
| 1n7q-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6456 |
0.7194 |
| 2brv-assembly1.cif.gz_X | 1 | 595 | 21 | 624 | 0.6443 |
0.7149 |
| 1n7r-assembly1.cif.gz_A | 1 | 595 | 22 | 631 | 0.6442 |
0.7179 |
| 2wda-assembly1.cif.gz_A | 1 | 595 | 19 | 616 | 0.6435 |
0.7257 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 595 | 34 | 638 | 0.734 |
0.7738 |
| AF-Q59288-F1-model_v4 | 5 | 595 | 37 | 586 | 0.5927 |
0.7007 |
| AF-P0CZ00-F1-model_v4 | 1 | 595 | 56 | 662 | 0.589 |
0.6887 |
| AF-Q9UL01-F1-model_v4 | 1 | 595 | 58 | 669 | 0.5307 |
0.6599 |
| AF-Q8BLI4-F1-model_v4 | 1 | 595 | 58 | 669 | 0.5286 |
0.6573 |
| AF-P0C2H4-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5146 |
0.6412 |