PROTEIN: HRGMv2_0222_45_15
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Protein File & Metadata
Source:
HRGMv2_0222_45_15.pdb
Genome ID:
Protein ID:
HRGMv2_0222_45_15
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Protein Sequence
MSVILLSILS MLSAFMQYVR NDYQPLDSQY AVFQGEHTGA ADERGVRTNA DLCMVAAFMG 60 EDTMALKTLT FAVHTHKAVR KRRCLDGRYW GSVSAKDHQW ESSLWAMSVA YSAYFQWQRL 120 PDSLKVDIYH LLKAECNYEL ERDIPTGYVG DTKAEENGWE VDVLAATLGL FPDDPLAPQW 180 FQRMRAFAIN SYSHPSDASD TTVIDPDYDV TRVCDLYKGP NLYPDWTLQN HDFFHTSYQN 240 VVIQELGEAA LALRLFQGKR QRWTSRALLH NCDKVTKNVL NWLTLPDGEQ AMPNGNDWSL 300 FLYDQVTSYA TMACLGRDPD ALYFEQQCLK RIVQRQQTTT DGSFLLRPDV GARRMGVQAH 360 RLLMTELMHR CWPTDDLTPS RWTDFERRHH GSKFFPCQQI VRTLTPRYFA CFSFSKGKKS 420 YTGYLAPIHD GQTDNLVIPF RQYNTGNIIG YYQPKTGHPN AKLVGEPTIN IKGDYFTVKA 480 TLAENDSTII RRFTLRSRAD GLEYNDDVKM KPADALKDYT GLLAISTDEF TGRNHQVDFQ 540 PGLTRIDNQL TIQTDSRVKA QWTKETIDNS IRSRRLAPYL AGTPKNRHHI IYRAN 595
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8HMP8-F1-model_v4 | 1 | 595 | 16 | 600 | 0.6729 |
0.722 |
| AF-Q59801-F1-model_v4 | 1 | 595 | 65 | 692 | 0.6035 |
0.7044 |
| AF-Q5RGL8-F1-model_v4 | 1 | 595 | 60 | 671 | 0.5214 |
0.6457 |
| AF-Q9UL01-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5084 |
0.6333 |
| AF-D3ZYE3-F1-model_v4 | 1 | 595 | 75 | 681 | 0.5083 |
0.683 |
| AF-Q8BLI4-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5039 |
0.6282 |
| AF-B5DF19-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5017 |
0.6251 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.7502 |
0.7752 |
| AF-A0A2Z4IP26-F1-model_v4 | PL37 | 1 | 595 | 35 | 638 | 0.7332 |
0.773 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7306 |
0.7722 |
| AF-A0A1B1Y531-F1-model_v4 | PL37 | 1 | 595 | 36 | 635 | 0.7265 |
0.7652 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7214 |
0.7646 |
| AF-A0A1B2HPA4-F1-model_v4 | CBM32 | 1 | 568 | 33 | 579 | 0.7107 |
0.8095 |
| AF-A0A0F7N859-F1-model_v4 | CBM32 | 1 | 595 | 36 | 764 | 0.7087 |
0.8343 |
| AF-A0A2K9EVI7-F1-model_v4 | CBM32 | 1 | 595 | 36 | 767 | 0.704 |
0.8302 |
| AF-A0A133L4X2-F1-model_v4 | GH154 | 1 | 595 | 21 | 594 | 0.6915 |
0.7513 |
| U7VBU7 | PL8 | 1 | 595 | 10 | 605 | 0.6793 |
0.7044 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A975CX51 | PL37 | 1 | 595 | 2 | 586 | 0.7502 |
0.7752 |
| A0A7G8UMI7 | PL37 | 3 | 595 | 1 | 597 | 0.7455 |
0.7655 |
| C6XTA3 | PL37 | 1 | 595 | 25 | 634 | 0.7338 |
0.7711 |
| A0A6P1THD6 | PL37 | 7 | 595 | 1 | 595 | 0.7323 |
0.7564 |
| C6Y378 | PL37 | 1 | 595 | 26 | 627 | 0.7317 |
0.7656 |
| A0A3B7MN57 | PL37 | 1 | 595 | 37 | 638 | 0.7312 |
0.7711 |
| A0A7X9TCJ0 | PL37 | 1 | 595 | 38 | 642 | 0.7306 |
0.7722 |
| A0A7G8UQS2 | PL37 | 4 | 595 | 1 | 610 | 0.7271 |
0.7563 |
| A0A2Z5FTG3 | PL37 | 1 | 595 | 45 | 650 | 0.7224 |
0.7704 |
| A0A413LPX4 | PL37 | 2 | 595 | 1 | 643 | 0.7214 |
0.7646 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1n7o-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.647 |
0.7207 |
| 1n7p-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.6464 |
0.7201 |
| 1n7n-assembly1.cif.gz_A | 1 | 595 | 21 | 631 | 0.646 |
0.7198 |
| 2brv-assembly1.cif.gz_X | 1 | 595 | 21 | 624 | 0.6445 |
0.7148 |
| 2wda-assembly1.cif.gz_A | 1 | 595 | 19 | 615 | 0.6433 |
0.7252 |
| 1j0n-assembly1.cif.gz_A | 1 | 595 | 21 | 622 | 0.6424 |
0.7275 |
| 2e24-assembly1.cif.gz_A | 1 | 595 | 21 | 622 | 0.6418 |
0.727 |
| 1rw9-assembly1.cif.gz_A | 1 | 595 | 23 | 628 | 0.6395 |
0.725 |
| 1rwh-assembly1.cif.gz_A | 1 | 595 | 23 | 628 | 0.6394 |
0.7249 |
| 2x03-assembly1.cif.gz_A | 1 | 595 | 18 | 616 | 0.6309 |
0.7125 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KMH5-F1-model_v4 | 1 | 595 | 34 | 638 | 0.733 |
0.7727 |
| AF-Q59801-F1-model_v4 | 1 | 595 | 65 | 692 | 0.6035 |
0.7044 |
| AF-P0CZ01-F1-model_v4 | 1 | 595 | 23 | 663 | 0.6035 |
0.7058 |
| AF-P0CZ00-F1-model_v4 | 1 | 595 | 56 | 662 | 0.5897 |
0.6896 |
| AF-Q53591-F1-model_v4 | 1 | 595 | 268 | 898 | 0.566 |
0.7102 |
| AF-Q54873-F1-model_v4 | 1 | 595 | 307 | 917 | 0.5578 |
0.7193 |
| AF-P0C2H4-F1-model_v4 | 1 | 595 | 58 | 669 | 0.521 |
0.6473 |
| AF-Q9UL01-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5084 |
0.6333 |
| AF-Q8BLI4-F1-model_v4 | 1 | 593 | 58 | 692 | 0.5039 |
0.6282 |