PROTEIN: HRGMv2_0222_39_4
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Protein File & Metadata
Source:
HRGMv2_0222_39_4.pdb
Genome ID:
Protein ID:
HRGMv2_0222_39_4
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Protein Sequence
MIQFRHSISI KTILASLATY LFVAGCSDDG LPTSAPIVPQ SQSSVTMSLT RATVDSFAQA 60 GIGEVRFFAY IRQNKRDSLV KDTTVNLGDG QFAIGLPLGE NIRAFIVANA MGVEGTEKFD 120 SVSLTLDPSH EANIWLSNVA SFTTDKTVSR VAFSLRRVVC RATFRPEEDA QTLASLGKFD 180 NIGVTFANIA TRYRISGDSA VVMSSVAMKV DASNGYTATI NSFPTREGLD PSAELLLTFY 240 RGTTVVNNSV ASIDGGFHYT DSHHYMITVP LTDNAFLETS WTRAAKITIP FQIHDTTF 298
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-I3YKC4-F1-model_v4 | GH28 | 40 | 298 | 32 | 272 | 0.4526 |
0.793 |
| AF-A0A4V0ZPZ7-F1-model_v4 | GH18 | 30 | 298 | 18 | 306 | 0.4339 |
0.7005 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I3YKC4 | GH28 | 40 | 298 | 32 | 272 | 0.4526 |
0.793 |
| A0A4V0ZPZ7 | GH18 | 30 | 298 | 18 | 306 | 0.4339 |
0.7005 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5nfi-assembly1.cif.gz_B | 41 | 296 | 1 | 272 | 0.6431 |
0.7418 |
| 5cag-assembly1.cif.gz_A | 36 | 281 | 10 | 280 | 0.637 |
0.7651 |
| 3gf8-assembly1.cif.gz_A | 42 | 296 | 1 | 274 | 0.6268 |
0.7316 |
| 4qdg-assembly1.cif.gz_A | 42 | 297 | 6 | 295 | 0.6183 |
0.7372 |
| 3pay-assembly1.cif.gz_B | 43 | 294 | 13 | 299 | 0.6146 |
0.7526 |
| 3pay-assembly1.cif.gz_D | 43 | 294 | 13 | 303 | 0.6143 |
0.7561 |
| 3pay-assembly1.cif.gz_C | 43 | 294 | 9 | 297 | 0.6135 |
0.7489 |
| 3pay-assembly1.cif.gz_A | 43 | 294 | 13 | 292 | 0.6078 |
0.7358 |
| 4gpv-assembly1.cif.gz_A | 40 | 298 | 6 | 321 | 0.5921 |
0.7254 |
| 4gpv-assembly2.cif.gz_B | 39 | 298 | 5 | 322 | 0.5861 |
0.7179 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B2RHG2-F1-model_v4 | 38 | 296 | 37 | 315 | 0.6048 |
0.7372 |
| AF-Q51827-F1-model_v4 | 31 | 298 | 10 | 379 | 0.5387 |
0.6867 |