PROTEIN: HRGMv2_0218_29_15
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Protein File & Metadata
Source:
HRGMv2_0218_29_15.pdb
Genome ID:
Protein ID:
HRGMv2_0218_29_15
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Protein Sequence
MSLIEIKKVE SKKDLKTFID FHYDLYEGNE YDVPNLFSDE MNTLSKDKNA AFEFCEAEYY 60 LAYKDGKLAG RVAAIINHKA NNKWGKKSVR FGWIDFIDDR EVSKALLDAV EKYGREKGME 120 DVVGPLGFTD MDPEGMLVWG FDQLGTMPTI YNYAYYPEHL EALEGFEVDN KYVEFKIMVP 180 DEVPEKYAKI AMMIEKRYNL HVRKLTKKDI FQGGMGQKIF DLINDTYKDL YGYSELSQKQ 240 IDQLIKSYLG FLDFNLITCI EDWTDGEHKL IGVGITMPSL AHALRKCHRG RLLPFGWFHV 300 LRAIKMHKTN IVDLLLIGIL PEYRAKGANA LLFADLIPWY QKYGIEWGET QVELETNAGV 360 QGQWGALTPV MHKRRKCYKK IIK 383
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8986 |
0.9354 |
| AF-X8EWX4-F1-model_v4 | 1 | 382 | 17 | 393 | 0.895 |
0.9329 |
| AF-P9WJM7-F1-model_v4 | 3 | 383 | 1 | 313 | 0.7238 |
0.8165 |
| AF-Q9CBC9-F1-model_v4 | 4 | 383 | 1 | 309 | 0.7124 |
0.81 |
| AF-K0EMI4-F1-model_v4 | 1 | 383 | 11 | 315 | 0.7024 |
0.8156 |
| AF-K0EYT8-F1-model_v4 | 1 | 381 | 9 | 259 | 0.6332 |
0.7923 |
| AF-A0A1D8PMF7-F1-model_v4 | 1 | 383 | 8 | 390 | 0.6081 |
0.6526 |
| AF-Q23414-F1-model_v4 | 1 | 381 | 19 | 313 | 0.6058 |
0.745 |
| AF-Q9NAR1-F1-model_v4 | 1 | 381 | 26 | 332 | 0.6051 |
0.7366 |
| AF-K0EUT6-F1-model_v4 | 1 | 383 | 14 | 316 | 0.6041 |
0.7105 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 382 | 15 | 339 | 0.7495 |
0.8445 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 383 | 409 | 740 | 0.4951 |
0.7458 |
| AF-A0A1D9PUT2-F1-model_v4 | GH3 | 1 | 383 | 583 | 968 | 0.4823 |
0.6966 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4804 |
0.7724 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 383 | 72 | 834 | 0.478 |
0.6599 |
| AF-A0A146FCW8-F1-model_v4 | GH3 | 1 | 382 | 104 | 859 | 0.4769 |
0.6656 |
| AF-A2QDM1-F1-model_v4 | GH3 | 1 | 382 | 104 | 859 | 0.4767 |
0.6653 |
| AF-A0A7R7ZLS0-F1-model_v4 | GH3 | 1 | 380 | 534 | 854 | 0.4732 |
0.7693 |
| AF-A0A7T6XHG4-F1-model_v4 | GH3 | 1 | 380 | 535 | 852 | 0.4732 |
0.7737 |
| AF-A0A7G5IXR1-F1-model_v4 | GH3 | 1 | 383 | 104 | 866 | 0.4724 |
0.6597 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 382 | 15 | 339 | 0.7495 |
0.8445 |
| A0A7C8H9M3 | GH3 | 1 | 380 | 550 | 877 | 0.4804 |
0.7724 |
| A0A7U2MF49 | GH3 | 1 | 383 | 72 | 834 | 0.478 |
0.6599 |
| V9M3A9 | GH3 | 1 | 380 | 536 | 858 | 0.4674 |
0.7546 |
| A0A7H8QUW2 | GH3 | 1 | 383 | 209 | 947 | 0.4638 |
0.6649 |
| E5A892 | GH3 | 1 | 383 | 540 | 884 | 0.4627 |
0.712 |
| A0A161HFD8 | GH3 | 1 | 383 | 570 | 968 | 0.4625 |
0.6671 |
| G1XST4 | GH3 | 1 | 383 | 606 | 1002 | 0.4582 |
0.6668 |
| A0A2V1AHZ9 | GH3 | 1 | 383 | 234 | 987 | 0.4557 |
0.6621 |
| WEW60026.1 | GH3 | 1 | 383 | 534 | 851 | 0.4547 |
0.7407 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5kf2-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.7261 |
0.8157 |
| 5kgh-assembly1.cif.gz_A | 4 | 383 | 1 | 316 | 0.726 |
0.815 |
| 2c27-assembly1.cif.gz_A | 7 | 381 | 1 | 301 | 0.7251 |
0.8286 |
| 7q3a-assembly1.cif.gz_A | 1 | 383 | 18 | 339 | 0.7248 |
0.8256 |
| 5kgh-assembly1.cif.gz_B | 4 | 383 | 1 | 313 | 0.7237 |
0.815 |
| 7q3a-assembly2.cif.gz_B | 1 | 383 | 17 | 340 | 0.7226 |
0.8202 |
| 5kga-assembly1.cif.gz_B | 4 | 383 | 1 | 316 | 0.7214 |
0.8094 |
| 5kf1-assembly1.cif.gz_B | 4 | 383 | 1 | 312 | 0.721 |
0.8133 |
| 1p0h-assembly1.cif.gz_A | 4 | 380 | 1 | 290 | 0.7047 |
0.8206 |
| 2wpw-assembly4.cif.gz_D | 3 | 383 | 1 | 322 | 0.6802 |
0.7635 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 382 | 15 | 390 | 0.8986 |
0.9354 |
| AF-D3Q4A8-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7593 |
0.8603 |
| AF-Q5EDG0-F1-model_v4 | 3 | 380 | 1 | 301 | 0.7461 |
0.8518 |
| AF-C6WPR7-F1-model_v4 | 3 | 380 | 1 | 297 | 0.7437 |
0.8546 |
| AF-B0RAV5-F1-model_v4 | 1 | 381 | 9 | 304 | 0.743 |
0.8647 |
| AF-A5CTZ8-F1-model_v4 | 1 | 381 | 11 | 306 | 0.7416 |
0.8658 |
| AF-C7QKH8-F1-model_v4 | 1 | 380 | 1 | 314 | 0.7414 |
0.8326 |
| AF-D1A4F4-F1-model_v4 | 1 | 383 | 1 | 297 | 0.7407 |
0.8509 |
| AF-C7MRC4-F1-model_v4 | 3 | 382 | 1 | 306 | 0.7403 |
0.8395 |
| AF-B8HD44-F1-model_v4 | 1 | 382 | 4 | 321 | 0.7402 |
0.8316 |