PROTEIN: HRGMv2_0217_62_46
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Protein File & Metadata
Source:
HRGMv2_0217_62_46.pdb
Genome ID:
Protein ID:
HRGMv2_0217_62_46
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Protein Sequence
MNYFFDKIVR LFCLFVFLFG HSSADAQNKE LPADINPYFG PVGKQPVMPN AAGFIQRWLL 60 LEPISVSVKS NVVFTDSYLK EKFYTQYFPK QMEIVPKDGA IVKVGKEKLK WHALDSKLYN 120 VKLFRFATSF GKPKYGVLFW AVTVIDCPEE MKDIRLAVGS NGASMWWLNG EEAVMLEGDR 180 RMVRDDVVSK KLTLKKGKNI LRGAVINGPG MSDFCIRFID GQGKPVRNLS IHVK 234
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4A750-F1-model_v4 | 43 | 234 | 116 | 283 | 0.3221 |
0.7143 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5632 |
0.983 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 32 | 234 | 382 | 700 | 0.5602 |
0.9715 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 32 | 234 | 482 | 697 | 0.5516 |
0.9549 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5053 |
0.9563 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 14 | 234 | 9 | 214 | 0.4775 |
0.8315 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 22 | 224 | 15 | 202 | 0.4296 |
0.8329 |
| A0A380YJ87 | GH20 | 13 | 234 | 354 | 837 | 0.4277 |
0.7096 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 24 | 234 | 61 | 277 | 0.4276 |
0.8002 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 13 | 234 | 354 | 837 | 0.4276 |
0.7093 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 49 | 223 | 458 | 622 | 0.4221 |
0.8591 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 33 | 234 | 379 | 701 | 0.5632 |
0.983 |
| D7SFH3 | GH43_2 | 32 | 234 | 482 | 697 | 0.5516 |
0.9549 |
| A0A7G9XVI1 | GH43_2 , GH8 | 32 | 234 | 843 | 1048 | 0.5053 |
0.9563 |
| A0A344TID5 | GH163 | 22 | 224 | 15 | 202 | 0.4296 |
0.8329 |
| A0A380YJ87 | GH20 | 13 | 234 | 354 | 837 | 0.4277 |
0.7096 |
| A0A402CZV5 | GH4 | 49 | 223 | 458 | 622 | 0.4221 |
0.8591 |
| A0A4V0I0Q3 | CBM51 , CBM67 | 1 | 234 | 79 | 770 | 0.4059 |
0.6294 |
| A0A1U9NQX6 | CBM51 , GH20 | 22 | 234 | 36 | 853 | 0.4043 |
0.6987 |
| A0A921M789 | GH2 | 18 | 234 | 719 | 1112 | 0.3985 |
0.7153 |
| BCM93550.1 | GH2 | 42 | 234 | 948 | 1134 | 0.3982 |
0.8234 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lhk-assembly2.cif.gz_B | 44 | 234 | 9 | 202 | 0.5439 |
0.6581 |
| 4ai0-assembly1.cif.gz_A | 44 | 234 | 21 | 241 | 0.4924 |
0.6406 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.