PROTEIN: HRGMv2_0217_144_19
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
HRGMv2_0217_144_19.pdb
Genome ID:
Protein ID:
HRGMv2_0217_144_19
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MNELNHSNHS KRIAANTLVL FARMLIITIV NLYTVRWVLK GLGTEDYGIY NAVAGVVTTG 60 TCISSVLAMA TQRFYSYAIG LGEKEKLTRI FSASVNLVFV FSIITILVLE LVGIWFVSTQ 120 MTIPADRLSA ASWVFQFSIF SFIFTLLQIP YIGAIFSNED MGVYALVSSV DCFLKLVIAA 180 FICIFGIDHL ILYSGAMMIE SGLVMVVYML VASRKYIECR YIKGIDKGLY RQLISFSGWT 240 FYGALSGMGM TQGSIILLNI FFGPLVNAAF CIGNQLYNAI NTLSNSIVVA FRPTLIKSYS 300 CQDMPYMQQL YFSANKAILY MLCLVAIPLM LETENVLQFW LGYSTPEIIL FCRLYIIYTI 360 VLTLHNPITI IMQAIGKIRK YSLYVESLTI MNIPICWGLF ILGFPSYTIF IVMIVLCLIA 420 HNIRLVMLRK AVPELKLRSY YKHLILPAFF ILGITSMLEL FLLQLPIAGF QRFGLIVISS 480 VMVMSILIYV WGFSEAERKL LHSLIHKVVN KRQTVL 516
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8CWT9-F1-model_v4 | 6 | 506 | 1 | 469 | 0.8035 |
0.8591 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 436 | 2 | 446 | 0.8012 |
0.8979 |
| AF-Q0PAV6-F1-model_v4 | 2 | 436 | 3 | 441 | 0.7952 |
0.8843 |
| AF-A0A0R0I9X1-F1-model_v4 | 3 | 434 | 2 | 439 | 0.793 |
0.8881 |
| AF-Q5F9J8-F1-model_v4 | 3 | 436 | 9 | 453 | 0.7919 |
0.8969 |
| AF-Q0PAP8-F1-model_v4 | 1 | 434 | 1 | 433 | 0.7916 |
0.8796 |
| AF-P71616-F1-model_v4 | 1 | 435 | 1 | 435 | 0.7891 |
0.8745 |
| AF-A0A132P645-F1-model_v4 | 4 | 436 | 4 | 440 | 0.7884 |
0.8928 |
| AF-P45272-F1-model_v4 | 2 | 435 | 4 | 452 | 0.7879 |
0.8969 |
| AF-Q8DNG1-F1-model_v4 | 3 | 439 | 8 | 450 | 0.7859 |
0.8829 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T089-F1-model_v4 | GT4 | 1 | 506 | 1 | 509 | 0.7322 |
0.7709 |
| AF-A0A160T2N7-F1-model_v4 | GT28 | 1 | 504 | 33 | 545 | 0.6905 |
0.7477 |
| QJC17489.1 | GT2 | 1 | 516 | 215 | 849 | 0.6703 |
0.8402 |
| AF-F2NKF2-F1-model_v4 | GT4 | 7 | 500 | 1 | 490 | 0.6547 |
0.881 |
| QNU38870.1 | GT4 | 8 | 505 | 1 | 475 | 0.6422 |
0.7636 |
| WBL35586.1 | GT4 | 1 | 516 | 203 | 807 | 0.6204 |
0.7626 |
| AF-A0A517Z2I8-F1-model_v4 | GT2 | 1 | 516 | 2 | 829 | 0.6154 |
0.7813 |
| A0A1S9M4N4 | GT2 | 8 | 436 | 277 | 693 | 0.6095 |
0.8702 |
| AF-A0A2U8PPB3-F1-model_v4 | GT4 | 9 | 516 | 1 | 698 | 0.6039 |
0.765 |
| AF-D7BDH0-F1-model_v4 | GT4 | 8 | 501 | 1 | 481 | 0.6032 |
0.8211 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T089 | GT4 | 1 | 506 | 1 | 509 | 0.7322 |
0.7709 |
| A0A160T2N7 | GT28 | 1 | 504 | 33 | 545 | 0.6905 |
0.7477 |
| QJC17489.1 | GT2 | 1 | 516 | 215 | 849 | 0.6703 |
0.8402 |
| F2NKF2 | GT4 | 7 | 500 | 1 | 490 | 0.6547 |
0.881 |
| QNU38870.1 | GT4 | 8 | 505 | 1 | 475 | 0.6422 |
0.7636 |
| WBL35586.1 | GT4 | 1 | 516 | 203 | 807 | 0.6204 |
0.7626 |
| A0A517Z2I8 | GT2 | 1 | 516 | 2 | 829 | 0.6154 |
0.7813 |
| A0A1S9M4N4 | GT2 | 8 | 436 | 277 | 693 | 0.6095 |
0.8702 |
| A0A9W6NQN0 | GT2 | 1 | 433 | 14 | 419 | 0.6092 |
0.8831 |
| A0A2U8PPB3 | GT4 | 9 | 516 | 1 | 698 | 0.6039 |
0.765 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6hfb-assembly3.cif.gz_C | 3 | 436 | 8 | 449 | 0.7946 |
0.8933 |
| 4mlb-assembly1.cif.gz_C | 3 | 436 | 8 | 450 | 0.7933 |
0.8928 |
| 6gwh-assembly1.cif.gz_A | 3 | 436 | 7 | 437 | 0.792 |
0.8851 |
| 3vvs-assembly1.cif.gz_A | 3 | 436 | 7 | 442 | 0.7872 |
0.8793 |
| 3w4t-assembly1.cif.gz_A | 3 | 436 | 7 | 444 | 0.7869 |
0.8809 |
| 3wbn-assembly1.cif.gz_A | 3 | 436 | 6 | 448 | 0.7865 |
0.8841 |
| 7php-assembly1.cif.gz_A | 4 | 435 | 3 | 446 | 0.7849 |
0.8904 |
| 6ids-assembly1.cif.gz_A | 3 | 435 | 1 | 433 | 0.7849 |
0.8731 |
| 5xjj-assembly1.cif.gz_A | 3 | 434 | 2 | 438 | 0.7846 |
0.8833 |
| 6z70-assembly1.cif.gz_A | 1 | 436 | 5 | 444 | 0.7834 |
0.8716 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46378-F1-model_v4 | 2 | 508 | 1 | 530 | 0.8296 |
0.8752 |
| AF-Q9Z7H5-F1-model_v4 | 1 | 509 | 1 | 536 | 0.8219 |
0.8724 |
| AF-Q9PJB9-F1-model_v4 | 2 | 510 | 1 | 533 | 0.8062 |
0.8504 |
| AF-Q71YH0-F1-model_v4 | 1 | 436 | 2 | 446 | 0.8056 |
0.905 |
| AF-Q92AG2-F1-model_v4 | 1 | 436 | 2 | 446 | 0.8037 |
0.9031 |
| AF-Q7N1G0-F1-model_v4 | 1 | 436 | 1 | 447 | 0.8034 |
0.8998 |
| AF-Q8Y654-F1-model_v4 | 1 | 436 | 2 | 446 | 0.8031 |
0.9025 |
| AF-Q8DPQ6-F1-model_v4 | 1 | 436 | 2 | 446 | 0.8012 |
0.8979 |
| AF-Q8P4E6-F1-model_v4 | 1 | 436 | 6 | 453 | 0.8004 |
0.9013 |
| AF-Q6FEY7-F1-model_v4 | 1 | 436 | 1 | 446 | 0.7996 |
0.8927 |