PROTEIN: HRGMv2_0217_144_18
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Protein File & Metadata
Source:
HRGMv2_0217_144_18.pdb
Genome ID:
Protein ID:
HRGMv2_0217_144_18
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Protein Sequence
MENKEEHLKQ IDVVAIAKEM KKHKKQYLIA LPITFVLSCL LIICVPRYYT STAKLAPEIS 60 SFSSSSLGDI ASSFGFDLGG SSSNGDAIFP ELYPELIESN DFMVGMFDVK VKSKDGSINT 120 TYYDYLATKR QTPWWTKAYN SVKQMFDTPD STVVSKNGKA NPFQLTRRQD QIARLMSKNI 180 KCDIDKKNYV ISITVEDQDP LICATLADTV QAKLQEFITD YRTKKAKKDL EYYKKLSSDA 240 KSKYERIRQQ YGSYSDANQD VVLESYRLKA NDMENEMQLL YNTYTTLQAQ VQQAQAKLLM 300 QTPAFTTLQS ASVPLKPAGP KRMIFVLAMT FLAFIVVTVY SIRKMIFRE 349
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8ZR36-F1-model_v4 | 3 | 349 | 20 | 365 | 0.5366 |
0.5811 |
| AF-Q9I1N4-F1-model_v4 | 9 | 349 | 3 | 485 | 0.504 |
0.68 |
| AF-Q0P8G9-F1-model_v4 | 31 | 332 | 28 | 349 | 0.4846 |
0.5874 |
| AF-K0EV96-F1-model_v4 | 8 | 349 | 1 | 200 | 0.4477 |
0.8338 |
| AF-Q9F7B1-F1-model_v4 | 1 | 349 | 9 | 450 | 0.4477 |
0.6075 |
| AF-P76387-F1-model_v4 | 1 | 349 | 10 | 451 | 0.4471 |
0.607 |
| AF-P38134-F1-model_v4 | 1 | 349 | 8 | 451 | 0.4387 |
0.5969 |
| AF-Q32HS6-F1-model_v4 | 3 | 349 | 11 | 451 | 0.4382 |
0.5991 |
| AF-A0A0H3GVU7-F1-model_v4 | 3 | 349 | 10 | 451 | 0.4331 |
0.5905 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1L5P6C4-F1-model_v4 | GT0 | 1 | 349 | 16 | 480 | 0.4234 |
0.6436 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 1 | 349 | 16 | 480 | 0.4184 |
0.6365 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 2 | 349 | 17 | 480 | 0.415 |
0.633 |
| AF-A0A387H7L2-F1-model_v4 | GT0 | 1 | 349 | 18 | 480 | 0.414 |
0.63 |
| A0A2L0WKS9 | GT0 | 2 | 349 | 18 | 481 | 0.4137 |
0.6316 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 2 | 349 | 18 | 481 | 0.4137 |
0.6316 |
| QNN05996.1 | GT4 | 1 | 349 | 2 | 472 | 0.3749 |
0.5806 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 2 | 349 | 369 | 878 | 0.3714 |
0.5724 |
| QTR45648.1 | GT4 | 6 | 349 | 106 | 882 | 0.3609 |
0.5609 |
| WGH78710.1 | PL1_2 | 3 | 349 | 26 | 435 | 0.3502 |
0.5434 |
Structural Homologs -
CAZyme-ID50
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7nhr-assembly1.cif.gz_G | 11 | 349 | 1 | 312 | 0.4785 |
0.6622 |
| 7nii-assembly1.cif.gz_H | 11 | 349 | 1 | 313 | 0.4668 |
0.6438 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q54519-F1-model_v4 | 1 | 349 | 1 | 203 | 0.564 |
0.7744 |
| AF-Q3K0S9-F1-model_v4 | 6 | 349 | 9 | 204 | 0.5615 |
0.797 |
| AF-P59221-F1-model_v4 | 6 | 349 | 8 | 204 | 0.5609 |
0.7915 |
| AF-Q04662-F1-model_v4 | 6 | 349 | 9 | 204 | 0.5607 |
0.7958 |
| AF-P0C0T8-F1-model_v4 | 6 | 349 | 9 | 204 | 0.5597 |
0.7944 |
| AF-P33698-F1-model_v4 | 1 | 349 | 18 | 486 | 0.4644 |
0.6477 |
| AF-Q9F7B1-F1-model_v4 | 1 | 349 | 9 | 450 | 0.4477 |
0.6075 |
| AF-P76387-F1-model_v4 | 1 | 349 | 10 | 451 | 0.4471 |
0.607 |
| AF-Q8Z5G6-F1-model_v4 | 1 | 349 | 9 | 450 | 0.4462 |
0.6052 |
| AF-O52788-F1-model_v4 | 1 | 349 | 5 | 464 | 0.4433 |
0.6055 |