PROTEIN: HRGMv2_0213_19_6
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Protein File & Metadata
Source:
HRGMv2_0213_19_6.pdb
Genome ID:
Protein ID:
HRGMv2_0213_19_6
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Protein Sequence
MEIRNIIVFC AAALLSTTIS CSKEWIPTPD PSQTKWTNQG PESDDPTPEP EPSEKWTEIT 60 DAKVALGETK VAEQTSSTFM KGYWPDGKLI PIKKGNVWQL FWGEATDALT TGDTPYPEDH 120 ISKLVNSSKV WGKEFVRIDG FNDGGSWFIG IFPLEKAGHY VGFFHAESHW DLSGTAHKSI 180 GVVYSDDYGA TWHDPKPIIT DKSPKPAKPD WTGLGDGCVI WDSANSRYIC YYQGKVASGA 240 NTLCMAASSD VNGAPGTWKK WDGEDFTLDA CSPETGLGGE NIPIANLTSP AGANPSVMWN 300 TFLNKWVMVY ATWGKRVVIT YSDDALHWSA PVKILGSIGS PAWYPNLIGE DGDLTGGEVA 360 KIYWSHNQND QGIRDLGYCK IKFLK 385
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B4FDS0-F1-model_v4 | 69 | 385 | 32 | 351 | 0.6265 |
0.7482 |
| AF-Q6ZA95-F1-model_v4 | 29 | 385 | 20 | 371 | 0.624 |
0.6901 |
| AF-Q9I278-F1-model_v4 | 60 | 385 | 31 | 349 | 0.6195 |
0.8354 |
| AF-Q93ZE3-F1-model_v4 | 11 | 385 | 4 | 433 | 0.5796 |
0.6496 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A433N6T4-F1-model_v4 | GH0 | 63 | 385 | 1 | 322 | 0.6719 |
0.7459 |
| AF-A0A7T5QS72-F1-model_v4 | GH0 | 63 | 385 | 1 | 322 | 0.6705 |
0.7445 |
| AF-Q0SI06-F1-model_v4 | GH183 | 69 | 385 | 1 | 326 | 0.6561 |
0.7477 |
| AF-A0A6S6G2K7-F1-model_v4 | GH43_34 | 49 | 385 | 13 | 296 | 0.6537 |
0.7983 |
| A0A9W5UNZ5 | GH43 | 50 | 382 | 36 | 338 | 0.6517 |
0.7841 |
| AF-A0A6C0G615-F1-model_v4 | GH137 | 59 | 382 | 1 | 334 | 0.6478 |
0.7416 |
| AF-A0A6N4W3N5-F1-model_v4 | GH183 | 60 | 384 | 29 | 414 | 0.6414 |
0.7936 |
| AF-Q5YND7-F1-model_v4 | GH183 | 55 | 383 | 47 | 361 | 0.6342 |
0.7577 |
| AF-A0A4P7RJD6-F1-model_v4 | GH183 | 55 | 383 | 49 | 370 | 0.6326 |
0.749 |
| AF-A0A4P7S871-F1-model_v4 | GH183 | 55 | 383 | 49 | 370 | 0.6323 |
0.7486 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9W5UNZ5 | GH43 | 50 | 382 | 36 | 338 | 0.6517 |
0.7841 |
| A0A7L8AEM0 | GH117 | 59 | 385 | 37 | 382 | 0.6155 |
0.732 |
| A0A6G9YTA5 | GH183 | 56 | 383 | 78 | 392 | 0.6135 |
0.7593 |
| A0A371QB17 | GH183 | 55 | 384 | 60 | 416 | 0.6083 |
0.7449 |
| A0A977KB89 | GH130_12 | 61 | 385 | 32 | 348 | 0.6036 |
0.7155 |
| A0A974WMG7 | GH43 | 67 | 385 | 38 | 345 | 0.6025 |
0.7326 |
| WGX97468.1 | GH43_30 | 43 | 385 | 18 | 343 | 0.5991 |
0.7011 |
| F6EH51 | GH183 | 55 | 385 | 77 | 428 | 0.5973 |
0.7571 |
| A0A517NM35 | GH62 | 60 | 383 | 63 | 375 | 0.5927 |
0.7289 |
| A0A8H7Y9V7 | GH43_6 | 55 | 385 | 66 | 370 | 0.5905 |
0.7419 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4o8n-assembly1.cif.gz_A | 60 | 383 | 2 | 302 | 0.653 |
0.75 |
| 3wn1-assembly1.cif.gz_A | 61 | 383 | 5 | 302 | 0.6498 |
0.7538 |
| 7zei-assembly4.cif.gz_D | 51 | 385 | 1 | 292 | 0.6497 |
0.7737 |
| 4n2r-assembly1.cif.gz_A | 61 | 384 | 4 | 303 | 0.6471 |
0.7505 |
| 6f1j-assembly1.cif.gz_A | 61 | 382 | 4 | 301 | 0.6466 |
0.7488 |
| 5b6t-assembly2.cif.gz_B | 60 | 385 | 1 | 316 | 0.6436 |
0.7252 |
| 5mui-assembly1.cif.gz_A | 59 | 382 | 7 | 338 | 0.6304 |
0.7287 |
| 4pvi-assembly1.cif.gz_A | 58 | 381 | 4 | 328 | 0.6244 |
0.6998 |
| 5ay9-assembly1.cif.gz_A | 51 | 385 | 22 | 356 | 0.5878 |
0.6887 |
| 4qqs-assembly1.cif.gz_A | 58 | 385 | 1 | 311 | 0.5703 |
0.6449 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.