PROTEIN: HRGMv2_0185_11_9
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Protein File & Metadata
Source:
HRGMv2_0185_11_9.pdb
Genome ID:
Protein ID:
HRGMv2_0185_11_9
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Protein Sequence
MEQNVISVSY GAKYKNYPFY NWVPKPLGII LLILLFIPIL TVGGVYTANS GEMTSGLGIQ 60 SEHIQFVGFV TSIGMAAFSP FFYQLVCIRR EKMMCVVGFS LLYLLSYVCA VTDSIFVMAL 120 CSLIMGFLRM VLMMVNLFTL IRYAFGMEAT RNITPGNEPD DEQGWDRLDS EKSKSMPIIY 180 LFFMILGQLG TSLTAWLAYE YQWQDVYYYM MGMTLVAILV VLVTMPYHAY NGRRFPITFR 240 KFGNVAVFSS MMTCGIYVLV YGKTLDWFAD PTIVRSTILT VVFAAVFFYM EWSHRSPYFL 300 MEVFRLRTIN MGIVLFLLLM VFNTSSMFVN VFTGIGMEID NWQNAALGNW SMLGYFIGAV 360 IAIILGSRNV KLKYLFGLGF LLIGVSALFM YFEVQTAGLY ERMKYPVIIR STGMMLIYSL 420 TAVYANQRMP YKYLSTWICI MLSVRMVIGP GIGSALYSNV LQHRQQHYVT MFAQDVDRTD 480 TQTASSYDQT LQGMRWQGRS ETEAENMAAM SAKGKVQVQA TLSAVKEMSG WTFYGCIISM 540 LFVLIYPYKK RKLSAWRD 558
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ0-F1-model_v4 | 8 | 554 | 1 | 507 | 0.821 |
0.8798 |
| AF-A0A0H3GNL5-F1-model_v4 | 1 | 553 | 1 | 520 | 0.8189 |
0.865 |
| AF-P52600-F1-model_v4 | 2 | 553 | 1 | 508 | 0.818 |
0.8756 |
| AF-P44927-F1-model_v4 | 2 | 553 | 1 | 508 | 0.8146 |
0.8711 |
| AF-Q32DH7-F1-model_v4 | 4 | 552 | 1 | 507 | 0.8064 |
0.866 |
| AF-Q5F680-F1-model_v4 | 8 | 553 | 1 | 502 | 0.801 |
0.8631 |
| AF-A0A0H3GSP9-F1-model_v4 | 5 | 552 | 11 | 538 | 0.7873 |
0.8411 |
| AF-Q8ZMK8-F1-model_v4 | 5 | 557 | 1 | 509 | 0.7824 |
0.8382 |
| AF-Q9I008-F1-model_v4 | 1 | 553 | 10 | 523 | 0.7821 |
0.8434 |
| AF-A0A0H3GU91-F1-model_v4 | 5 | 556 | 1 | 509 | 0.7817 |
0.8374 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T6G0-F1-model_v4 | CBM9 | 9 | 558 | 7 | 541 | 0.7325 |
0.7792 |
| ARF89445.1 | GT1 | 5 | 552 | 261 | 952 | 0.6325 |
0.8172 |
| AF-Q6NMN6-F1-model_v4 | GT5 | 12 | 558 | 18 | 473 | 0.6244 |
0.7263 |
| AF-A0A387HHJ8-F1-model_v4 | GT1 | 14 | 558 | 31 | 541 | 0.5868 |
0.8109 |
| AF-A0A8A3PDC7-F1-model_v4 | CE0 | 1 | 558 | 128 | 832 | 0.5352 |
0.6475 |
| AF-A0A7H8RF34-F1-model_v4 | CBM24 | 1 | 558 | 293 | 768 | 0.5337 |
0.7261 |
| A0A9Q9RZ67 | GH78 | 1 | 558 | 701 | 1461 | 0.5158 |
0.7509 |
| F9G000 | GH3 | 1 | 557 | 39 | 562 | 0.5 |
0.765 |
| AF-A0A7H8QT70-F1-model_v4 | GH27 | 3 | 558 | 38 | 757 | 0.4985 |
0.6519 |
| AF-S5VEU6-F1-model_v4 | CE14 | 15 | 558 | 20 | 788 | 0.4944 |
0.6052 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T6G0 | CBM9 | 9 | 558 | 7 | 541 | 0.7325 |
0.7792 |
| ARF89445.1 | GT1 | 5 | 552 | 261 | 952 | 0.6325 |
0.8172 |
| A0A387HHJ8 | GT1 | 14 | 558 | 31 | 541 | 0.5868 |
0.8109 |
| A0A7H8RF34 | CBM24 | 1 | 558 | 293 | 768 | 0.5337 |
0.7261 |
| A0A9Q9RZ67 | GH78 | 1 | 558 | 701 | 1461 | 0.5158 |
0.7509 |
| F9G000 | GH3 | 1 | 557 | 39 | 562 | 0.5 |
0.765 |
| A0A7H8QT70 | GH27 | 3 | 558 | 38 | 757 | 0.4985 |
0.6519 |
| S5VEU6 | CE14 | 15 | 558 | 20 | 788 | 0.4944 |
0.6052 |
| A0A8S2B775 | GT5 | 5 | 557 | 215 | 918 | 0.4861 |
0.6171 |
| A0A9Q8T2G0 | CE1 | 1 | 558 | 375 | 881 | 0.4798 |
0.6468 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 8pnl-assembly1.cif.gz_A | 11 | 550 | 1 | 483 | 0.7365 |
0.8063 |
| 7y58-assembly1.cif.gz_A | 8 | 556 | 4 | 509 | 0.7293 |
0.7862 |
| 8pnl-assembly2.cif.gz_C | 11 | 550 | 1 | 486 | 0.7248 |
0.7923 |
| 7d5p-assembly1.cif.gz_A | 25 | 550 | 1 | 408 | 0.699 |
0.8209 |
| 7d5p-assembly2.cif.gz_B | 25 | 550 | 1 | 413 | 0.6965 |
0.8141 |
| 7d5q-assembly1.cif.gz_A | 17 | 550 | 1 | 403 | 0.6942 |
0.8193 |
| 7d5q-assembly2.cif.gz_B | 17 | 550 | 1 | 411 | 0.6942 |
0.8131 |
| 6gs4-assembly1.cif.gz_A | 24 | 554 | 2 | 468 | 0.6741 |
0.7514 |
| 4zow-assembly1.cif.gz_A | 13 | 549 | 1 | 391 | 0.6727 |
0.8054 |
| 6eia-assembly1.cif.gz_A | 15 | 552 | 1 | 464 | 0.6651 |
0.7433 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P0AEJ1-F1-model_v4 | 8 | 556 | 1 | 508 | 0.8221 |
0.8796 |
| AF-P0AEJ0-F1-model_v4 | 8 | 554 | 1 | 507 | 0.821 |
0.8798 |
| AF-P52600-F1-model_v4 | 2 | 553 | 1 | 508 | 0.818 |
0.8756 |
| AF-P44927-F1-model_v4 | 2 | 553 | 1 | 508 | 0.8146 |
0.8711 |
| AF-Q9RQ29-F1-model_v4 | 8 | 553 | 1 | 502 | 0.8066 |
0.8685 |
| AF-P0DPR7-F1-model_v4 | 10 | 552 | 8 | 512 | 0.7967 |
0.8581 |
| AF-P37594-F1-model_v4 | 15 | 553 | 1 | 495 | 0.7718 |
0.8338 |
| AF-D0ZXQ3-F1-model_v4 | 15 | 554 | 1 | 495 | 0.768 |
0.8302 |
| AF-P94574-F1-model_v4 | 15 | 553 | 1 | 452 | 0.7653 |
0.8599 |
| AF-P9WJW9-F1-model_v4 | 15 | 553 | 1 | 508 | 0.7629 |
0.8154 |