PROTEIN: HRGMv2_0162_16_19
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Protein File & Metadata
Source:
HRGMv2_0162_16_19.pdb
Genome ID:
Protein ID:
HRGMv2_0162_16_19
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Protein Sequence
MTENKHKQQV VISMTSFPAA IPFAEDAVHS LLNGSVLPDK LILYVTLSQF AEGEMPEGLL 60 ALAKENPVFE IRNYDRDIRS YRKLIPALAD FPEAIIVTVD DDVYYHRNML KDLLDLHAQI 120 PDAILAHRAK RIKYGMPYKK WSKYRWYHFL FKRIYRRFDN IQTGVGGVLY PPHSLRADMM 180 DVELFTKLAP STDDIWFWAA GAANGFPVVP VPFGHNKPHG LHKPKELSLK TSNFKAGVDR 240 NVKAFNAICE HYPEIKRLVE KQ 262
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57022-F1-model_v4 | 5 | 259 | 1 | 236 | 0.6942 |
0.7744 |
| AF-Q0P9A9-F1-model_v4 | 7 | 262 | 1 | 253 | 0.6912 |
0.7552 |
| AF-Q48215-F1-model_v4 | 8 | 262 | 1 | 239 | 0.6793 |
0.7693 |
| AF-I1MD27-F1-model_v4 | 5 | 262 | 40 | 301 | 0.6767 |
0.7789 |
| AF-O24928-F1-model_v4 | 7 | 260 | 1 | 236 | 0.6748 |
0.765 |
| AF-A0A0N4UMA5-F1-model_v4 | 6 | 253 | 18 | 276 | 0.6741 |
0.7537 |
| AF-Q9C975-F1-model_v4 | 4 | 262 | 41 | 304 | 0.6707 |
0.7729 |
| AF-A0A0R0GDK3-F1-model_v4 | 5 | 262 | 40 | 293 | 0.6673 |
0.7692 |
| AF-Q0P9B5-F1-model_v4 | 7 | 262 | 1 | 298 | 0.6654 |
0.7511 |
| AF-K7UC91-F1-model_v4 | 4 | 262 | 45 | 312 | 0.6645 |
0.7731 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F0R503-F1-model_v4 | GT0 | 4 | 262 | 1 | 260 | 0.9345 |
0.9545 |
| AF-Q7VK28-F1-model_v4 | GT0 | 9 | 262 | 1 | 254 | 0.8796 |
0.9153 |
| AF-A0A346MS06-F1-model_v4 | GT0 | 1 | 262 | 1 | 257 | 0.8745 |
0.9072 |
| AF-Q74IJ0-F1-model_v4 | GT0 | 1 | 262 | 1 | 257 | 0.8741 |
0.9068 |
| AF-A0A6B9HYZ4-F1-model_v4 | GT0 | 1 | 262 | 1 | 257 | 0.8727 |
0.9057 |
| A0A9X7TCI1 | GT0 | 4 | 262 | 3 | 257 | 0.8672 |
0.9063 |
| AF-E6W6P2-F1-model_v4 | GT0 | 7 | 261 | 31 | 273 | 0.8489 |
0.9434 |
| AF-F4LMH6-F1-model_v4 | GT0 | 7 | 262 | 27 | 278 | 0.8445 |
0.917 |
| AF-Q21E82-F1-model_v4 | GT0 | 7 | 262 | 27 | 273 | 0.8411 |
0.931 |
| AF-F4AXW5-F1-model_v4 | GT0 | 7 | 262 | 31 | 275 | 0.8374 |
0.928 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| C2EGY1 | GT2 | 6 | 260 | 1 | 262 | 0.7187 |
0.7656 |
| A0A6H1ZAT1 | GT2 | 8 | 257 | 1 | 225 | 0.7085 |
0.7886 |
| A0A975PQK5 | GT2 | 1 | 261 | 1 | 259 | 0.708 |
0.776 |
| UTW42468.1 | GT2 | 8 | 260 | 1 | 268 | 0.7053 |
0.7626 |
| A0A7G9BPV5 | GT2 | 4 | 261 | 1 | 247 | 0.7022 |
0.7765 |
| A0ZGF1 | GT2 | 4 | 257 | 20 | 275 | 0.7014 |
0.7651 |
| Q2SJF3 | GT2 | 2 | 260 | 5 | 277 | 0.7 |
0.757 |
| A0A378U4N0 | GT2 | 5 | 262 | 1 | 245 | 0.6995 |
0.7755 |
| SON73815.1 | GT2 | 5 | 260 | 1 | 242 | 0.6986 |
0.79 |
| B0SNU6 | GT2 | 5 | 252 | 1 | 239 | 0.6973 |
0.7541 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1on8-assembly1.cif.gz_A | 6 | 262 | 1 | 251 | 0.7197 |
0.7791 |
| 1on6-assembly1.cif.gz_B | 5 | 262 | 1 | 243 | 0.71 |
0.7808 |
| 5z8b-assembly1.cif.gz_A | 9 | 225 | 1 | 199 | 0.7066 |
0.842 |
| 1qgs-assembly1.cif.gz_A | 8 | 262 | 1 | 238 | 0.6858 |
0.7416 |
| 4d11-assembly4.cif.gz_F | 7 | 225 | 49 | 276 | 0.6177 |
0.7697 |
| 4d11-assembly3.cif.gz_C | 6 | 262 | 53 | 344 | 0.579 |
0.748 |
| 6e4r-assembly1.cif.gz_A | 6 | 262 | 65 | 366 | 0.5748 |
0.7797 |
| 1vh3-assembly2.cif.gz_B | 9 | 228 | 1 | 240 | 0.5734 |
0.6784 |
| 5ve7-assembly1.cif.gz_A | 7 | 225 | 1 | 255 | 0.5732 |
0.7202 |
| 5i1f-assembly1.cif.gz_A-2 | 5 | 227 | 1 | 263 | 0.5724 |
0.716 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q57022-F1-model_v4 | 5 | 259 | 1 | 236 | 0.6942 |
0.7744 |
| AF-Q03084-F1-model_v4 | 5 | 260 | 3 | 244 | 0.6936 |
0.7876 |
| AF-O32268-F1-model_v4 | 4 | 260 | 2 | 240 | 0.6915 |
0.7655 |
| AF-Q46635-F1-model_v4 | 9 | 261 | 1 | 238 | 0.6849 |
0.7784 |
| AF-B5L3F2-F1-model_v4 | 5 | 262 | 1 | 235 | 0.6815 |
0.7667 |
| AF-Q48215-F1-model_v4 | 8 | 262 | 1 | 239 | 0.6793 |
0.7693 |
| AF-P71054-F1-model_v4 | 5 | 262 | 2 | 241 | 0.674 |
0.7762 |
| AF-Q9C975-F1-model_v4 | 4 | 262 | 41 | 304 | 0.6707 |
0.7729 |
| AF-Q9LY62-F1-model_v4 | 3 | 262 | 66 | 322 | 0.6568 |
0.7674 |
| AF-P9WMX2-F1-model_v4 | 6 | 257 | 1 | 259 | 0.6508 |
0.7456 |