PROTEIN: HRGMv2_0159_12_102
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Protein File & Metadata
Source:
HRGMv2_0159_12_102.pdb
Genome ID:
Protein ID:
HRGMv2_0159_12_102
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Protein Sequence
MKRINILRNL IIGLAMVACA SCSDFFEPDN NTILRGDDYM RENSELYAGF LGIVTKVQAI 60 GDKAIYLTDT RAELLEPTEN TPGELYSLYN YDDDLSGNSY ADPAKYYDVI ISCNDFMQKA 120 KAYKDAHETS VDMDHYRGLI SSALRVKTWI YLTLGKIYGQ AAWIDDPLQS FADFSNFEIK 180 DLEGILDACE NLLSTGFDGV NGTYNMDWRA WLDPTGTDSE VISTYEYWNM MVPEYFVLQA 240 EISLWKGNYQ NTVSVLLKEM NRVFAQNRGK LSRTKYMRSG SYTNGYGGWF TTATPDETVA 300 ESVIIYNYQY NQKNSLLKHF DTTGEYVLRA SLAGVNRFKD PAYNPPKNPA DKFTTENRSK 360 TFKEVVKDME YSVQKYRGMG SKLGHTVAHD DVQIYIYHTA DLYFMLVEAL NNLGRYEIAD 420 ILMNQGFYLT YGALAKVTDN AVWKNTGFTN DWGKDLTEEG SYRTYEDRGI RGILNLGNRD 480 MWREGNGKTD LEIKRHNDLE ILKEALLEFP CEGKTYPIML RIARRWNDYS IISQFVGEKY 540 SDTAKRLEVA SKIEGGAYFV PWDLSKTASS H 571
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 21 | 568 | 31 | 876 | 0.5375 |
0.684 |
| U6RU08 | PL8 | 4 | 571 | 26 | 949 | 0.4535 |
0.6876 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A414WUJ8 | GH16 | 21 | 568 | 31 | 876 | 0.5375 |
0.684 |
| U6RU08 | PL8 | 4 | 571 | 26 | 949 | 0.4535 |
0.6876 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3jq1-assembly1.cif.gz_A | 36 | 570 | 1 | 452 | 0.7421 |
0.8474 |
| 3jq1-assembly2.cif.gz_B | 36 | 570 | 1 | 454 | 0.7408 |
0.8445 |
| 3myv-assembly2.cif.gz_B | 36 | 570 | 1 | 432 | 0.7324 |
0.8557 |
| 3l22-assembly1.cif.gz_A | 34 | 570 | 1 | 423 | 0.7287 |
0.8521 |
| 3hdx-assembly1.cif.gz_A | 34 | 569 | 1 | 446 | 0.7216 |
0.8308 |
| 3mcx-assembly1.cif.gz_A | 41 | 570 | 1 | 450 | 0.7191 |
0.8223 |
| 7kv1-assembly2.cif.gz_B | 42 | 569 | 1 | 448 | 0.7162 |
0.8205 |
| 7kv1-assembly1.cif.gz_A | 42 | 569 | 1 | 447 | 0.7158 |
0.8208 |
| 3kez-assembly1.cif.gz_A | 34 | 570 | 1 | 436 | 0.7153 |
0.8324 |
| 6gcz-assembly1.cif.gz_A | 36 | 569 | 1 | 453 | 0.7022 |
0.7992 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-T2KN63-F1-model_v4 | 31 | 569 | 26 | 495 | 0.6981 |
0.8041 |
| AF-T2KPM5-F1-model_v4 | 32 | 569 | 33 | 494 | 0.6949 |
0.8109 |
| AF-T2KNB8-F1-model_v4 | 32 | 569 | 29 | 513 | 0.6848 |
0.7816 |
| AF-A7LXT5-F1-model_v4 | 29 | 568 | 30 | 532 | 0.6745 |
0.7568 |
| AF-Q8A1G2-F1-model_v4 | 30 | 568 | 31 | 541 | 0.6484 |
0.7198 |