PROTEIN: HRGMv2_0140_2_4
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Protein File & Metadata
Source:
HRGMv2_0140_2_4.pdb
Genome ID:
Protein ID:
HRGMv2_0140_2_4
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Protein Sequence
MLGVLSWAVI VGYLVAASRY CHAQQEQTLC RGLRVKVLDS AERGFITPAM VKNWFAAEQK 60 EFLREPVGKV NTLEVEAFVR RRGFVKTVRA YTSMDGMLNI ELTQRKPVLR VNSVNGYDFY 120 VTDDNYILPT QRYYSVYVPV VTGMIVPPFG PDFVGSLDDW SKKGEKKVSE NYLFLANLIN 180 FVKFVESDGF WSAFWVQINV RDGDSEGRYN PQIELVPRAG DQIVCLGSLD DYRSKLDKLT 240 SFYRNGLAYE GWEACRYINL AYRGQVVCSD 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q5F6M1-F1-model_v4 | 23 | 270 | 31 | 230 | 0.6155 |
0.796 |
| AF-G3XDA7-F1-model_v4 | 19 | 270 | 67 | 271 | 0.5915 |
0.8045 |
| AF-K0ELF0-F1-model_v4 | 9 | 268 | 37 | 248 | 0.5873 |
0.7326 |
| AF-Q7CR81-F1-model_v4 | 24 | 270 | 50 | 256 | 0.5484 |
0.7277 |
| AF-A0A0H3GN94-F1-model_v4 | 25 | 270 | 61 | 266 | 0.5463 |
0.7407 |
| AF-P06136-F1-model_v4 | 24 | 270 | 49 | 255 | 0.5413 |
0.7182 |
| AF-Q32JZ9-F1-model_v4 | 24 | 270 | 49 | 255 | 0.541 |
0.7173 |
| AF-P9WNA1-F1-model_v4 | 1 | 269 | 93 | 314 | 0.5363 |
0.7073 |
| AF-P45067-F1-model_v4 | 25 | 270 | 48 | 250 | 0.5278 |
0.6886 |
| AF-A0A132Z7A8-F1-model_v4 | 1 | 270 | 104 | 333 | 0.5225 |
0.7348 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2vh2-assembly1.cif.gz_A | 30 | 270 | 2 | 196 | 0.6374 |
0.7764 |
| 2vh2-assembly2.cif.gz_B | 31 | 270 | 4 | 195 | 0.6335 |
0.7821 |
| 6h9o-assembly2.cif.gz_C | 31 | 270 | 1 | 191 | 0.6258 |
0.7651 |
| 6h9o-assembly1.cif.gz_A | 31 | 270 | 1 | 191 | 0.6237 |
0.7645 |
| 2vh1-assembly1.cif.gz_A | 31 | 270 | 1 | 198 | 0.608 |
0.7367 |
| 2vh1-assembly2.cif.gz_B | 31 | 270 | 1 | 194 | 0.6078 |
0.7379 |
| 8hhh-assembly1.cif.gz_Q | 23 | 270 | 25 | 234 | 0.5732 |
0.7097 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D0MGK7-F1-model_v4 | 1 | 270 | 18 | 260 | 0.6953 |
0.7993 |
| AF-Q2S526-F1-model_v4 | 12 | 270 | 23 | 255 | 0.6542 |
0.7649 |
| AF-P94336-F1-model_v4 | 1 | 269 | 1 | 222 | 0.6487 |
0.7443 |
| AF-P45503-F1-model_v4 | 23 | 270 | 1 | 208 | 0.6438 |
0.7562 |
| AF-Q97H88-F1-model_v4 | 17 | 270 | 28 | 247 | 0.6397 |
0.7722 |
| AF-Q1GAT4-F1-model_v4 | 1 | 270 | 43 | 269 | 0.6396 |
0.7892 |
| AF-B4UES6-F1-model_v4 | 20 | 270 | 45 | 265 | 0.6393 |
0.8225 |
| AF-Q83F15-F1-model_v4 | 22 | 270 | 36 | 240 | 0.6271 |
0.794 |
| AF-Q0VRZ9-F1-model_v4 | 23 | 270 | 50 | 253 | 0.621 |
0.8111 |
| AF-P45518-F1-model_v4 | 1 | 270 | 23 | 264 | 0.6178 |
0.7052 |