PROTEIN: HRGMv2_0140_12_26
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Protein File & Metadata
Source:
HRGMv2_0140_12_26.pdb
Genome ID:
Protein ID:
HRGMv2_0140_12_26
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Protein Sequence
MEKYSLKEVT TRDDAREFLD FAKRLYRDEP NWICPLDQDI ERRFDPKYNE LLRDGEAIRW 60 LALDTRGRTA GRIAAFYNPE LAAAADGQPT GGCGFFESID DQQVADLMFD AAKEWLARKG 120 MEAMDGPVNF GDRDQWWGLL TKGFEFTPLY ANPYNFEYYI RLFENYGFQN YFNQHTYLRE 180 LAEGLFPDNV YERVKRLQEE PRYSFEHMDK RKRSLQQYAE DFRTVYNKAW AKFTGVKPIE 240 KEHALALMNS LRPIIDQRLM YFAYYDGEPI GFYLMIPDLN GVIAPLKGRF GAWDKLRFLW 300 RLKVSRKATR IFALIFGVIP EFQGKGIESG MIYNFEQQVN TPHLKRYKSL ELAWIGDFNP 360 LMMRMVETLV CAKKHKMHTT YRYLFDREKP FTRAPKMTVK KD 402
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 385 | 15 | 390 | 0.8035 |
0.8635 |
| AF-X8EWX4-F1-model_v4 | 1 | 385 | 16 | 393 | 0.7674 |
0.8287 |
| AF-K0EMI4-F1-model_v4 | 1 | 390 | 10 | 316 | 0.6972 |
0.8196 |
| AF-Q9CBC9-F1-model_v4 | 4 | 392 | 1 | 311 | 0.6881 |
0.7939 |
| AF-P9WJM7-F1-model_v4 | 5 | 395 | 1 | 315 | 0.6537 |
0.7531 |
| AF-Q54G61-F1-model_v4 | 3 | 385 | 1 | 307 | 0.5871 |
0.6885 |
| AF-K0EYT8-F1-model_v4 | 1 | 384 | 9 | 259 | 0.5866 |
0.7495 |
| AF-Q54DW0-F1-model_v4 | 3 | 389 | 1 | 321 | 0.5762 |
0.6646 |
| AF-Q2FW01-F1-model_v4 | 1 | 390 | 1 | 293 | 0.5738 |
0.6865 |
| AF-Q19661-F1-model_v4 | 3 | 401 | 1 | 303 | 0.5587 |
0.6729 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160T427-F1-model_v4 | GH13 | 1 | 385 | 14 | 339 | 0.6343 |
0.7361 |
| AF-Q2UKN1-F1-model_v4 | GH3 | 1 | 386 | 246 | 740 | 0.4849 |
0.6567 |
| AF-A0A7U2MF49-F1-model_v4 | GH3 | 1 | 389 | 71 | 835 | 0.4659 |
0.6519 |
| AF-A0A7G5IXR1-F1-model_v4 | GH3 | 1 | 386 | 525 | 866 | 0.4622 |
0.7304 |
| A0A7C8H9M3 | GH3 | 1 | 383 | 549 | 877 | 0.4551 |
0.7477 |
| WEW60026.1 | GH3 | 1 | 389 | 533 | 852 | 0.4517 |
0.7521 |
| AF-V9M3A9-F1-model_v4 | GH3 | 1 | 383 | 535 | 858 | 0.4512 |
0.7449 |
| AF-A0A7R7ZLS0-F1-model_v4 | GH3 | 1 | 383 | 534 | 854 | 0.449 |
0.746 |
| AF-B6HCA2-F1-model_v4 | GH3 | 1 | 383 | 534 | 852 | 0.4468 |
0.7478 |
| A0R4V1 | GT2 | 1 | 402 | 301 | 677 | 0.4429 |
0.5995 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160T427 | GH13 | 1 | 385 | 14 | 339 | 0.6343 |
0.7361 |
| A0A7U2MF49 | GH3 | 1 | 389 | 71 | 835 | 0.4659 |
0.6519 |
| A0A5K7YHP0 | GT4 | 1 | 395 | 335 | 707 | 0.4562 |
0.6262 |
| A0A7C8H9M3 | GH3 | 1 | 383 | 549 | 877 | 0.4551 |
0.7477 |
| WEW60026.1 | GH3 | 1 | 389 | 533 | 852 | 0.4517 |
0.7521 |
| V9M3A9 | GH3 | 1 | 383 | 535 | 858 | 0.4512 |
0.7449 |
| A0A7H8QUW2 | GH3 | 1 | 390 | 206 | 949 | 0.4432 |
0.6422 |
| A0R4V1 | GT2 | 1 | 402 | 301 | 677 | 0.4429 |
0.5995 |
| A0A6H1RBS1 | GT1 | 1 | 402 | 331 | 660 | 0.4425 |
0.6629 |
| UPL03096.1 | GH3 | 1 | 386 | 249 | 966 | 0.4423 |
0.6508 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1p0h-assembly1.cif.gz_A | 5 | 383 | 1 | 290 | 0.7002 |
0.8298 |
| 5kf2-assembly1.cif.gz_A | 5 | 389 | 1 | 317 | 0.6593 |
0.7583 |
| 5kgh-assembly1.cif.gz_A | 5 | 386 | 1 | 316 | 0.6558 |
0.7564 |
| 5kgh-assembly1.cif.gz_B | 5 | 386 | 1 | 313 | 0.6526 |
0.7553 |
| 5kga-assembly1.cif.gz_B | 5 | 386 | 1 | 316 | 0.6516 |
0.7516 |
| 5kf1-assembly1.cif.gz_B | 5 | 386 | 1 | 312 | 0.649 |
0.7519 |
| 2c27-assembly1.cif.gz_A | 7 | 391 | 1 | 301 | 0.63 |
0.7403 |
| 2wpw-assembly4.cif.gz_D | 4 | 387 | 1 | 323 | 0.6251 |
0.7165 |
| 3tt2-assembly1.cif.gz_A | 1 | 397 | 2 | 314 | 0.6179 |
0.7172 |
| 7wx5-assembly1.cif.gz_A | 1 | 388 | 1 | 288 | 0.6157 |
0.7376 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q46840-F1-model_v4 | 1 | 385 | 15 | 390 | 0.8035 |
0.8635 |
| AF-A4ZHT6-F1-model_v4 | 3 | 391 | 1 | 295 | 0.703 |
0.828 |
| AF-Q1B3A6-F1-model_v4 | 3 | 390 | 1 | 300 | 0.7023 |
0.8218 |
| AF-A1ULU4-F1-model_v4 | 3 | 390 | 1 | 300 | 0.702 |
0.8214 |
| AF-A3Q695-F1-model_v4 | 3 | 390 | 1 | 300 | 0.7013 |
0.8207 |
| AF-Q5Z297-F1-model_v4 | 1 | 392 | 1 | 303 | 0.6969 |
0.8136 |
| AF-B8ZSU0-F1-model_v4 | 4 | 392 | 1 | 311 | 0.695 |
0.8015 |
| AF-Q0S740-F1-model_v4 | 1 | 391 | 1 | 305 | 0.6907 |
0.8047 |
| AF-A0QAU8-F1-model_v4 | 2 | 391 | 1 | 316 | 0.6897 |
0.79 |
| AF-Q9CBC9-F1-model_v4 | 4 | 392 | 1 | 311 | 0.6881 |
0.7939 |