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PROTEIN: HRGMv2_0130_10_127

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_0130_10_127.pdb
Genome ID:
HRGMv2_0130
Protein ID:
HRGMv2_0130_10_127

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Detailed structural information will appear here after analysis...

Protein Sequence 
MLASLLAAGM   PLVAQNLGSE   YRLKRVIPVE   GRQGIAADSA   YYYVSGSTAL   YKYDKQGRLV 60
AKNERPFEGL   PLAANHIGDI   DVWDGEIYAG   IETFDDGRGE   NIQVAVYDAG   NLKWKRSIDW 120
EPESGQVEVC   GLAVDRDGDM   VWMADWVDGR   YVYGYDRKTG   QYVRKVHLRP   VPQWQQGIFM 180
VDGRMLISAD   DGDADLDEPD   NLYVADLRDG   KSYATVLPLR   SMADFRRPGE   IEGLALDPAT 240
DDLLVLANRG   ARIVLGMPRG   FYPGYDGEVH   EVYVFEKVK 279
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0N4U624-F1-model_v4 13 279 1 316 0.5931 0.678
AF-A0A0K0DZ69-F1-model_v4 21 278 47 323 0.589 0.6969
AF-A0A044TZQ5-F1-model_v4 25 278 16 294 0.5711 0.6711
AF-A4HYL2-F1-model_v4 20 279 16 367 0.5693 0.7404
AF-K7K771-F1-model_v4 16 279 3 271 0.5616 0.6252
AF-Q6AYI2-F1-model_v4 20 278 1 335 0.5606 0.7086
AF-Q8VEM9-F1-model_v4 20 278 1 335 0.5593 0.7062
AF-J9FNK5-F1-model_v4 25 278 16 294 0.5535 0.6671
AF-Q9ERF3-F1-model_v4 19 279 4 305 0.5502 0.6339
AF-A0A077Z1I5-F1-model_v4 13 279 1 317 0.547 0.6279
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A191TMP5-F1-model_v4 GH43_2 24 279 39 311 0.64 0.7759
AF-A0A1Z1FH08-F1-model_v4 GH43_29 24 279 12 290 0.6397 0.7531
AF-A0A1P8PTT5-F1-model_v4 GH43_29 24 279 26 308 0.6323 0.7604
AF-A0A5B8CN25-F1-model_v4 GH43_29 24 279 26 308 0.6317 0.7615
AF-A0A7M2GL82-F1-model_v4 GH43_29 24 279 26 308 0.6314 0.7612
AF-A0A0C5XN02-F1-model_v4 GH43_29 24 279 26 308 0.6314 0.7612
AF-L0FXV7-F1-model_v4 GH117 17 278 34 357 0.6301 0.7678
AF-A0A2K9NKB2-F1-model_v4 GH43_29 24 279 28 310 0.6282 0.7584
AF-W0A813-F1-model_v4 GH43_29 24 279 29 311 0.6281 0.7594
AF-A0A1P8X133-F1-model_v4 GH43_29 24 279 32 314 0.6266 0.76
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UNY97481.1 GH117 16 279 42 368 0.651 0.7989
A0A7D6XNF3 GH43_3 23 279 38 312 0.6403 0.7729
A0A1H2H7A6 GH43 23 279 26 290 0.6399 0.7546
A0A7X9THD4 GH43 25 279 20 282 0.6398 0.749
A0A1L7FA03 GH43_29 20 279 42 322 0.635 0.7599
A0A4V0ZPZ9 GH43_3 23 279 40 330 0.6318 0.7788
A0A411X7M4 GH43_29 22 279 19 316 0.6221 0.7474
USD67687.1 GH43 20 279 31 379 0.6148 0.7889
A0A7H0HZ14 GH183 19 279 76 393 0.5966 0.7574
A0A345XMJ4 GH183 18 279 82 404 0.592 0.7561
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6jbu-assembly1.cif.gz_A 10 279 1 258 0.6614 0.7218
5ftu-assembly1.cif.gz_D 13 279 1 258 0.6534 0.714
4rml-assembly1.cif.gz_A 12 279 1 251 0.644 0.7113
7qrw-assembly1.cif.gz_A 22 279 2 276 0.6431 0.7105
6ou1-assembly1.cif.gz_A 14 279 1 258 0.639 0.6961
5ex7-assembly1.cif.gz_A 19 279 4 274 0.6365 0.6961
6xg7-assembly1.cif.gz_A 16 274 2 288 0.6332 0.7116
4zlr-assembly1.cif.gz_A 20 279 5 275 0.6319 0.6978
2qe8-assembly1.cif.gz_A 22 279 1 331 0.6236 0.753
6pke-assembly2.cif.gz_B 14 279 1 254 0.6177 0.6791
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q93XW5-F1-model_v4 21 279 5 324 0.5893 0.7022
AF-Q5JS37-F1-model_v4 17 279 44 339 0.5812 0.6966
AF-Q5R9V0-F1-model_v4 18 279 44 339 0.5809 0.6993
AF-P18417-F1-model_v4 19 279 33 341 0.5678 0.6902
AF-Q10281-F1-model_v4 19 278 2 314 0.561 0.6577
AF-Q6AYI2-F1-model_v4 20 278 1 335 0.5606 0.7086
AF-Q58CV6-F1-model_v4 20 278 1 335 0.5597 0.7083
AF-Q8VEM9-F1-model_v4 20 278 1 335 0.5593 0.7062
AF-Q9BQ90-F1-model_v4 20 278 1 335 0.5593 0.7065
AF-G4MQX3-F1-model_v4 18 279 2 314 0.5589 0.6528
Download Full SwissProt Results