PROTEIN: C55_contig_3613_45
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Protein File & Metadata
Source:
C55_contig_3613_45.pdb
Genome ID:
Protein ID:
C55_contig_3613_45
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Protein Sequence
MKNILSMSLA AKQKIDRFYE GMDRLLDKIN QLDMVKGIRS HIDRLIDVFN QISNKLVYLL 60 LTSYTLIFTF VSFNLINFQS RSYDYVFHLS RIVGLAESIE HWDLLPNLNF LFAFGTGYAS 120 PMFYGNWQFY PSAIVYMMTN DGNLAYSIFA FLITLGTSLT SYIVVSKIVK NKLTGIVVAL 180 TIPCYYTLFG FGMTMVVPLV PILIYSIYRV LYLNKKNPLY LGIVVALLIQ THILSTIILA 240 IFSAVFLCLN YKRITLEKII SFVFSILFAL CLSAGYIFQY LEQVSSQKFF FTWTARNFPV 300 NVKDTFLVPF PFQADRYGFY KPFTPLEWPI HQFVRDGLFY ASMMVILFYR RLGSLSKTIF 360 WTCWILYFSA TSLLPWNSVL KYTFLGSMQY SGRLLFFIPL LFLFFLAVTN RNGFFSIVLC 420 ILSLTFYFNH VVPQFDISSK NYKQMRDDNK KNEKLLKSVY RGDKSKYIDP VGDEYYNLDI 480 NNQDIRLPQF TEFQTAKDVK ISAIKKRYNL LEFDIEVPDD KKETTISIPM IWYKGYRAEY 540 SKGAEGSQPV LKQRAFTESE LKENKKDRKP TVSEKVLNDG KIYLSIRNSG HVKVSYHKTF 600 IQYLGFMIEW ISWILVFFIF KQKYSKNKKQ FPS 633
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CFT8-F1-model_v4 | 48 | 627 | 1 | 535 | 0.7715 |
0.8552 |
| AF-A0A5P3FT45-F1-model_v4 | 51 | 631 | 1 | 540 | 0.7699 |
0.8433 |
| AF-A0A133CH43-F1-model_v4 | 49 | 626 | 2 | 544 | 0.7601 |
0.8314 |
| AF-A0A1S8IUA0-F1-model_v4 | 48 | 633 | 10 | 566 | 0.7415 |
0.8094 |
| AF-A0A133CH37-F1-model_v4 | 144 | 630 | 1 | 451 | 0.6733 |
0.8107 |
| AF-K0EMA3-F1-model_v4 | 47 | 632 | 36 | 760 | 0.6175 |
0.7351 |
| AF-K0EUF9-F1-model_v4 | 50 | 630 | 1 | 721 | 0.616 |
0.7298 |
| AF-K0EVD5-F1-model_v4 | 47 | 630 | 5 | 724 | 0.6139 |
0.727 |
| AF-K0EV20-F1-model_v4 | 61 | 630 | 1 | 706 | 0.6094 |
0.7273 |
| AF-Q8DMX0-F1-model_v4 | 51 | 624 | 4 | 846 | 0.5963 |
0.7547 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 51 | 633 | 5 | 602 | 0.6324 |
0.7632 |
| UCV16279.1 | GT83 | 33 | 517 | 1 | 516 | 0.5737 |
0.6819 |
| A0A8D5JSU7 | GT83 | 44 | 593 | 1 | 491 | 0.5736 |
0.6583 |
| A0A9Q8YAG0 | GT83 | 42 | 521 | 1 | 508 | 0.5731 |
0.6828 |
| A0A7W5PQ56 | GT83 | 41 | 504 | 1 | 467 | 0.569 |
0.6899 |
| AF-A0A2H5FQE0-F1-model_v4 | GT83 | 37 | 503 | 1 | 446 | 0.5673 |
0.7131 |
| AF-C3M8P7-F1-model_v4 | GT83 | 42 | 504 | 1 | 463 | 0.5673 |
0.6878 |
| AF-D3HKM9-F1-model_v4 | GT83 | 36 | 503 | 1 | 446 | 0.5673 |
0.7132 |
| AF-A0A249NPY1-F1-model_v4 | GT83 | 41 | 504 | 1 | 463 | 0.5665 |
0.6868 |
| A0A2S2CG33 | GT83 | 41 | 489 | 10 | 431 | 0.5653 |
0.7327 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 51 | 633 | 5 | 602 | 0.6324 |
0.7632 |
| F2LXI8 | GT83 | 43 | 513 | 2 | 412 | 0.5839 |
0.7327 |
| UCV16279.1 | GT83 | 33 | 517 | 1 | 516 | 0.5737 |
0.6819 |
| A0A8D5JSU7 | GT83 | 44 | 593 | 1 | 491 | 0.5736 |
0.6583 |
| A0A9Q8YAG0 | GT83 | 42 | 521 | 1 | 508 | 0.5731 |
0.6828 |
| A0A1V0HVL7 | GT83 | 46 | 593 | 6 | 491 | 0.5724 |
0.6626 |
| A0A2Z4Y6P6 | GT83 | 46 | 506 | 1 | 457 | 0.5724 |
0.7003 |
| A0A7W5PQ56 | GT83 | 41 | 504 | 1 | 467 | 0.569 |
0.6899 |
| A0A2S2CG33 | GT83 | 41 | 489 | 10 | 431 | 0.5653 |
0.7327 |
| A0A3M4VJW3 | GT83 | 45 | 493 | 1 | 444 | 0.5652 |
0.7095 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 50 | 633 | 14 | 614 | 0.7509 |
0.8137 |