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PROTEIN: C54_scaffold_3399_302

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Protein File & Metadata
Download PDB File
Source:
C54_scaffold_3399_302.pdb
Genome ID:
C54.bin_6
Protein ID:
C54_scaffold_3399_302

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKTLKLLFLL   SCLLYSSFAF   SQEATLSSGE   VTLNITRQKD   NTYGVTFSAY   GKEFNAGTEQ 60
NPALLIDVKM   NTFYPTYTSY   TKEGDKVELT   ARLTTTPRTT   VFEINDVYTA   KGNGEFELKR 120
NVKVAELGDN   PYDEGFSSSF   GLQFAPEDVL   ANSEYFIPAV   WYKGNFEKDG   NIPAGIPVAT 180
DLSFLYREDR   IPLPVVMMRQ   KESGLTFTLV   HKDSKCETVL   NDSRGVVVDE   NYQFGGVGVV 240
NWKKSDSFAA   VVTYPGSDLR   TGGMGRRMHP   ITKGFDKHTY   NVYFKIDKTS   DYANAVNEAW 300
ELAFNLYNPK   IYDVNLNSAY   RGLIETVNHY   YLDSSVDKDI   KGPGFPWSVK   LTDFSLVRDT 360
YEIGFVGSQP   IAGYALFRAG   VETGNEEYKV   RGNNVLNLWA   SEGLTDLGLP   KTRYAALWGT 420
WDNWAKTSMR   QACNGMAGLL   NAWCYAKRNG   IDIPSWLNAC   KKFGEFLVTN   QNADGSYYLE 480
YDPFSVVGGK   HPAGNQNKFL   TICAVRYLVE   LYIATNDERY   KTAALKAAEF   SYANIHERYL 540
YVACVVDNPQ   TIDSESGQQA   INGFLAIYDL   TKDPKWLTAA   EQAATYTESW   SYMFEVPVEK 600
DQTAKTDWPK   DRSIVGQHII   AIGHSATDLG   FAWSSFVYYR   LYLLTGKEHY   LHVARISAHN 660
TKQSMNLGQE   LYPGQPEGLQ   QEAFQVRVSN   GAGRRMNSIM   EALTWNFAAH   LDPMIRFKDA 720
FGTYDLEEVE   AMPKFKVEEL   NNRYSKYQSS   DYGQDPETGI   ETIDENSLSA   YVSGDQLFLV 780
NKGKEDISKV   ELTDLAGRRL   WTEDMKVTDE   EYTFPMHGTF   SGFYILNVCL   VSGEQKAFKV 840
YKNK 844
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-U7Q602-F1-model_v4 2 841 1 853 0.6593 0.7115
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6G7C516-F1-model_v4 GH182 1 757 1 671 0.7961 0.8937
AF-A0A4Y1VDV5-F1-model_v4 GH182 28 755 7 666 0.7941 0.9016
AF-F0SA38-F1-model_v4 GH182 19 756 9 671 0.7905 0.8973
AF-Q8A3Q5-F1-model_v4 GH182 27 755 14 677 0.7897 0.8993
AF-A0A1C7H3C6-F1-model_v4 GH182 28 754 16 677 0.7894 0.9014
AF-A0A0P0FJN3-F1-model_v4 GH182 28 755 16 682 0.7891 0.8981
AF-C9KR64-F1-model_v4 GH182 30 751 15 676 0.7891 0.9004
AF-A0A139KUB7-F1-model_v4 GH182 28 751 17 676 0.7889 0.9027
AF-D6CY91-F1-model_v4 GH182 28 751 18 676 0.7889 0.9039
A0A9E8YN59 GH182 18 754 10 668 0.7885 0.898
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A9E8YN59 GH182 18 754 10 668 0.7885 0.898
A0A255SPN4 GH182 49 754 14 666 0.7835 0.8987
UJH67547.1 GH182 21 756 18 673 0.7809 0.897
A0A268K8D9 GH182 29 765 1 673 0.7805 0.8751
A0A139L1L8 GH182 28 755 42 703 0.7725 0.8996
A0A6I6K1P7 GH182 28 730 19 678 0.7686 0.8811
WHP16390.1 GH182 20 731 1 673 0.7676 0.8612
A0A1U9NH28 GH182 28 728 23 681 0.7619 0.8768
A0A2S0VPZ6 GH182 28 760 30 721 0.7555 0.8543
A0A7Z2ZP54 CBM13 , CBM66 2 745 294 1149 0.7007 0.9159
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5nok-assembly2.cif.gz_B 30 720 1 669 0.5281 0.5986
5nok-assembly1.cif.gz_A 27 720 1 668 0.5271 0.5978
Download Full PDB Results
Structural Homologs - SwissProt