PROTEIN: C54_contig_5485_43
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Protein File & Metadata
Source:
C54_contig_5485_43.pdb
Genome ID:
Protein ID:
C54_contig_5485_43
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Protein Sequence
MNKLVWKLLR QHISIGQLTG FFLANIFGML IVLLSVQFYK DVLPVFTQGD SFMKKDYIIA 60 TKKISTLGSI TGQSNTFSKD EIKELEAQPF TRSVGAFTPT LFKVSAGLGM EQAGIRISTD 120 MFFESVPDEF VDVSLDKWHF DEGTQTIPII IPRNYLNLYN FGFAQSRNLP KLSEGVMGLI 180 QMDIVMRGNG RVEQYKGNIV GFSNRLNTIL VPQSFMEWAN QAFASEREAQ PSRLIVEVKN 240 PTDTAITDYF QQKNYETEGD NLDAGKTTYF LRLITGIVSG VGLFISILSF YILMLSVFLL 300 LQKNTAKLEN LLLIGYSPSK VALPYHVLTV GLNLLVLILA IGGVAWLRSY YTGVLQTLIP 360 QLETGSLLPC ILAGSILFIA VSALNILLIR RKVLSIWKGS KEK 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I760-F1-model_v4 | 1 | 400 | 5 | 394 | 0.6828 |
0.7276 |
| AF-A0A132P1Z1-F1-model_v4 | 1 | 403 | 3 | 422 | 0.6009 |
0.6452 |
| AF-P9WG19-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5854 |
0.6889 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5842 |
0.6875 |
| AF-P44872-F1-model_v4 | 1 | 403 | 15 | 310 | 0.5776 |
0.6976 |
| AF-K0F5F4-F1-model_v4 | 1 | 399 | 1 | 301 | 0.5686 |
0.6654 |
| AF-Q58207-F1-model_v4 | 1 | 403 | 1 | 365 | 0.5438 |
0.5907 |
| AF-E3UT01-F1-model_v4 | 1 | 400 | 1 | 450 | 0.5292 |
0.5906 |
| AF-Q0P7W7-F1-model_v4 | 1 | 388 | 5 | 351 | 0.5181 |
0.5977 |
| AF-P44250-F1-model_v4 | 1 | 400 | 3 | 411 | 0.5109 |
0.5467 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 400 | 1 | 486 | 0.5275 |
0.6048 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 400 | 1 | 486 | 0.5275 |
0.6048 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7v8i-assembly1.cif.gz_E | 1 | 397 | 1 | 402 | 0.5649 |
0.6067 |
| 8tzk-assembly1.cif.gz_C | 1 | 403 | 12 | 304 | 0.5129 |
0.6203 |
| 5lil-assembly1.cif.gz_A | 1 | 400 | 246 | 609 | 0.5039 |
0.6744 |
| 5lj6-assembly1.cif.gz_A | 1 | 400 | 240 | 594 | 0.4843 |
0.6559 |
| 5nik-assembly1.cif.gz_J | 1 | 400 | 105 | 624 | 0.4784 |
0.5974 |
| 5lil-assembly1.cif.gz_B | 1 | 400 | 247 | 598 | 0.476 |
0.6491 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5U7B6-F1-model_v4 | 1 | 396 | 1 | 297 | 0.5857 |
0.6887 |
| AF-P9WG19-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5854 |
0.6889 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5842 |
0.6875 |
| AF-A5FMG4-F1-model_v4 | 10 | 400 | 9 | 289 | 0.5837 |
0.7145 |
| AF-Q7TX91-F1-model_v4 | 1 | 399 | 1 | 297 | 0.5837 |
0.6869 |
| AF-P9WG18-F1-model_v4 | 1 | 399 | 1 | 297 | 0.583 |
0.6857 |
| AF-O35005-F1-model_v4 | 1 | 401 | 1 | 428 | 0.5825 |
0.6355 |
| AF-P44872-F1-model_v4 | 1 | 403 | 15 | 310 | 0.5776 |
0.6976 |
| AF-O34876-F1-model_v4 | 1 | 399 | 4 | 296 | 0.5743 |
0.6842 |
| AF-P0AC31-F1-model_v4 | 1 | 403 | 58 | 352 | 0.5508 |
0.7052 |