PROTEIN: C54_contig_3258_1525
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Protein File & Metadata
Source:
C54_contig_3258_1525.pdb
Genome ID:
Protein ID:
C54_contig_3258_1525
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Protein Sequence
MKIHKWFSFL ACMFLLGACS DDDKALGEQG VIVETPTVLE TSTSSIQLQA TLVSTNKVIL 60 AKRGFCYSTE SNPNIYKATV IGEGNNTFEA TLKELSANTT YYIRAFVSIY QGGIAYSPQI 120 TVTTFEGTNI PND 133
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9H6D8-F1-model_v4 | 24 | 133 | 40 | 147 | 0.4911 |
0.7705 |
| AF-Q68FM6-F1-model_v4 | 10 | 133 | 260 | 388 | 0.3167 |
0.5988 |
| AF-D3ZH36-F1-model_v4 | 25 | 132 | 291 | 387 | 0.3153 |
0.7323 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2S1LG26-F1-model_v4 | GH16_16 | 20 | 133 | 26 | 395 | 0.4907 |
0.8647 |
| AF-A0A386HR19-F1-model_v4 | GH16_10 | 19 | 132 | 31 | 377 | 0.4681 |
0.8116 |
| AF-A0A1D9P8M2-F1-model_v4 | GH16_10 | 28 | 129 | 45 | 149 | 0.4648 |
0.906 |
| AF-A0A4P7VQI0-F1-model_v4 | GH43_4 | 24 | 130 | 28 | 136 | 0.4561 |
0.9416 |
| AF-A0A2R3MQH3-F1-model_v4 | GH43_4 | 18 | 133 | 24 | 613 | 0.4525 |
0.8681 |
| AF-A0A5P3ANQ2-F1-model_v4 | GH43_4 | 9 | 130 | 13 | 129 | 0.4432 |
0.8378 |
| AF-C6IEL0-F1-model_v4 | GH43_4 | 23 | 133 | 26 | 545 | 0.4375 |
0.8745 |
| AF-A0A679HE15-F1-model_v4 | GH43_4 | 24 | 133 | 27 | 545 | 0.4357 |
0.8785 |
| AF-A6KZ37-F1-model_v4 | GH43_4 | 9 | 129 | 12 | 127 | 0.4357 |
0.8281 |
| AF-A0A0N7J6U4-F1-model_v4 | GH43_4 | 10 | 130 | 14 | 128 | 0.4357 |
0.8348 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S1LG26 | GH16_16 | 20 | 133 | 26 | 395 | 0.4907 |
0.8647 |
| F7M5P9 | GH16_3 | 25 | 133 | 22 | 145 | 0.4748 |
0.8835 |
| A0A386HR19 | GH16_10 | 19 | 132 | 31 | 377 | 0.4681 |
0.8116 |
| A0A1D9P8M2 | GH16_10 | 28 | 129 | 45 | 149 | 0.4648 |
0.906 |
| A0A380Z964 | GH10 | 28 | 130 | 143 | 251 | 0.4245 |
0.898 |
| A0A1C7GXI6 | GH43_4 | 27 | 130 | 31 | 131 | 0.4243 |
0.9299 |
| A0A5P9P703 | CBM5 , GH18 | 8 | 133 | 121 | 405 | 0.4072 |
0.7175 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9H6D8-F1-model_v4 | 24 | 133 | 40 | 147 | 0.4911 |
0.7705 |
| AF-Q68FM6-F1-model_v4 | 10 | 133 | 260 | 388 | 0.3167 |
0.5988 |