PROTEIN: C54_contig_3258_1443
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Protein File & Metadata
Source:
C54_contig_3258_1443.pdb
Genome ID:
Protein ID:
C54_contig_3258_1443
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Protein Sequence
MKKLYLSLAF LSAFTFQVSA QLQGLDVVKV PEAQQPYSGE YVYIPDVDGY KTLKCDFHTH 60 TIFSDGDVKP ENRVWEGAIR GLDVIAITDH IEYRPNKFIT ADHNESYRRA KTVEESSNLV 120 VIPGAEITRS KPLGHINALF LKDANALDVE DPLVAIDNAL EQGAFIMWNH PGWPNDTSTI 180 YKVHKDLIKQ KKIHGVELVN GFEYYPKAFN YCKEYNLTYM GNTDIHGVYK QTYRTDKQYG 240 PMTIIFAKER SHEGVKEALF AGRSVVKFGD VLIGAEKNLT ALVKACLAYE VKEVNGNQAL 300 VKVVNKSTLN FEILLDNKAG TILGNATVEF KVRLNDKIKF TNTYITDNSQ LVINVASLK 359
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44176-F1-model_v4 | 44 | 278 | 1 | 269 | 0.5281 |
0.7019 |
| AF-A0A0H3GRN3-F1-model_v4 | 42 | 262 | 3 | 284 | 0.518 |
0.7437 |
| AF-Q5FAE5-F1-model_v4 | 54 | 278 | 1 | 270 | 0.5156 |
0.7195 |
| AF-Q32GS4-F1-model_v4 | 41 | 258 | 3 | 287 | 0.5145 |
0.7584 |
| AF-O54453-F1-model_v4 | 41 | 261 | 6 | 287 | 0.5119 |
0.7437 |
| AF-P77766-F1-model_v4 | 42 | 263 | 3 | 285 | 0.5117 |
0.7408 |
| AF-Q9HZ40-F1-model_v4 | 53 | 257 | 1 | 286 | 0.509 |
0.7976 |
| AF-A0A0D2GG65-F1-model_v4 | 46 | 353 | 172 | 481 | 0.4957 |
0.6633 |
| AF-Q54IG4-F1-model_v4 | 35 | 271 | 113 | 354 | 0.4621 |
0.7962 |
| AF-Q54B73-F1-model_v4 | 34 | 271 | 111 | 352 | 0.4574 |
0.7971 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-B3DWM3-F1-model_v4 | GT28 | 47 | 325 | 394 | 638 | 0.4163 |
0.7675 |
| AF-A0A1H2ECD2-F1-model_v4 | GT28 | 13 | 325 | 193 | 725 | 0.4148 |
0.6393 |
| AF-A0A0C1UQM4-F1-model_v4 | GT28 | 47 | 325 | 392 | 635 | 0.4148 |
0.7691 |
| QYM64029.1 | GH38 | 34 | 359 | 56 | 328 | 0.4133 |
0.7772 |
| A0A0B7GRQ1 | GH0 | 46 | 346 | 8 | 317 | 0.4076 |
0.6783 |
| AF-A0A0B7GRQ1-F1-model_v4 | GH0 | 46 | 346 | 8 | 317 | 0.4076 |
0.6783 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1H2ECD2 | GT28 | 13 | 325 | 193 | 725 | 0.4148 |
0.6393 |
| QYM64029.1 | GH38 | 34 | 359 | 56 | 328 | 0.4133 |
0.7772 |
| WCB91666.1 | GT4 | 47 | 271 | 421 | 625 | 0.3897 |
0.8599 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3e38-assembly1.cif.gz_B | 34 | 359 | 1 | 343 | 0.8736 |
0.9491 |
| 2anu-assembly1.cif.gz_B | 50 | 270 | 1 | 220 | 0.648 |
0.8168 |
| 2anu-assembly1.cif.gz_C | 50 | 270 | 1 | 222 | 0.6467 |
0.814 |
| 2anu-assembly1.cif.gz_A | 50 | 270 | 1 | 223 | 0.6461 |
0.8173 |
| 2anu-assembly2.cif.gz_F | 50 | 270 | 1 | 223 | 0.6456 |
0.8167 |
| 7ug9-assembly1.cif.gz_A | 54 | 278 | 1 | 199 | 0.6039 |
0.8032 |
| 3e0f-assembly1.cif.gz_A | 43 | 260 | 3 | 281 | 0.5197 |
0.7557 |
| 2yb4-assembly1.cif.gz_A | 42 | 256 | 1 | 277 | 0.5089 |
0.745 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P44176-F1-model_v4 | 44 | 278 | 1 | 269 | 0.5281 |
0.7019 |
| AF-Q7NXD4-F1-model_v4 | 44 | 256 | 1 | 281 | 0.5129 |
0.7608 |
| AF-O54453-F1-model_v4 | 41 | 261 | 6 | 287 | 0.5119 |
0.7437 |
| AF-P77766-F1-model_v4 | 42 | 263 | 3 | 285 | 0.5117 |
0.7408 |
| AF-O84432-F1-model_v4 | 31 | 350 | 191 | 616 | 0.4824 |
0.6812 |
| AF-Q9Z840-F1-model_v4 | 30 | 350 | 156 | 615 | 0.4803 |
0.6768 |
| AF-Q9PJW8-F1-model_v4 | 14 | 350 | 195 | 616 | 0.4794 |
0.6485 |
| AF-P9WNT4-F1-model_v4 | 23 | 279 | 32 | 324 | 0.3287 |
0.6713 |
| AF-P9WNT5-F1-model_v4 | 24 | 282 | 30 | 326 | 0.3259 |
0.6602 |
| AF-Q73U92-F1-model_v4 | 24 | 279 | 25 | 317 | 0.3246 |
0.6653 |