PROTEIN: C50_contig_11_2175
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Protein File & Metadata
Source:
C50_contig_11_2175.pdb
Genome ID:
Protein ID:
C50_contig_11_2175
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Protein Sequence
MNRLVWKLLR QHISIGQLTG FFLANLFGML IVLLSVQFYR DVLPVFTQGD SFMKKNYIIA 60 TKKISALGSF TGRSNTFSPK EIEEMKEQSF TESVGAFTPS LFKVSAGLGM QEAGIHLSTE 120 MFFESVPDEY VDVSLNNWHF DESAQVIPII IPRNYLNLYN FGFAQSRNLP KLSEGLMSLI 180 QMDIMLRGNG RAEQFKGKIV GFSNRLNTIL VPQAFMDWAN QRFAPGKEAR PSRLIVEVKN 240 PADTAVSDYF QQQHYEPEGD GLDAGKTTHF LRLITGIVMG VGLFISILSF YILMLSIFLL 300 LQKNTVKLEN LLLIGYSPNR VALPYNILTC GLNLAVLILS VGGVAWVRSY YTEIIGALFP 360 QLETGTLLPC WTAGCLLCLA VSSLNIVMIR RKIMSIWKGR 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I760-F1-model_v4 | 1 | 398 | 5 | 392 | 0.6537 |
0.7007 |
| AF-A0A132P1Z1-F1-model_v4 | 1 | 400 | 3 | 419 | 0.596 |
0.6432 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.591 |
0.6944 |
| AF-P9WG19-F1-model_v4 | 1 | 396 | 1 | 297 | 0.5894 |
0.6916 |
| AF-P44872-F1-model_v4 | 1 | 400 | 15 | 309 | 0.5734 |
0.6929 |
| AF-Q8DQS4-F1-model_v4 | 1 | 400 | 1 | 417 | 0.5697 |
0.6154 |
| AF-Q0P7W8-F1-model_v4 | 1 | 396 | 2 | 421 | 0.5683 |
0.6201 |
| AF-K0F5F4-F1-model_v4 | 1 | 396 | 1 | 301 | 0.5676 |
0.6622 |
| AF-A0A132YZQ6-F1-model_v4 | 1 | 399 | 1 | 495 | 0.5613 |
0.6451 |
| AF-Q8DQS2-F1-model_v4 | 1 | 400 | 1 | 453 | 0.556 |
0.6169 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 399 | 1 | 487 | 0.5497 |
0.6287 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A837AKF4 | CBM50 | 1 | 399 | 1 | 487 | 0.5497 |
0.6287 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7mdy-assembly1.cif.gz_B | 1 | 400 | 1 | 406 | 0.5742 |
0.6121 |
| 7v8i-assembly1.cif.gz_E | 1 | 400 | 5 | 404 | 0.5713 |
0.6063 |
| 8tzk-assembly1.cif.gz_C | 1 | 400 | 12 | 304 | 0.5147 |
0.621 |
| 5lil-assembly1.cif.gz_A | 1 | 400 | 246 | 609 | 0.5125 |
0.6838 |
| 5lj6-assembly1.cif.gz_A | 1 | 400 | 111 | 594 | 0.4919 |
0.6011 |
| 5nik-assembly1.cif.gz_J | 1 | 399 | 109 | 623 | 0.4889 |
0.6092 |
| 5lil-assembly1.cif.gz_B | 1 | 399 | 111 | 597 | 0.4828 |
0.5936 |
| 5lj7-assembly1.cif.gz_A | 1 | 400 | 246 | 585 | 0.4748 |
0.661 |
| 5lj7-assembly1.cif.gz_B | 1 | 399 | 111 | 591 | 0.4726 |
0.5788 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A5FMG4-F1-model_v4 | 10 | 400 | 9 | 290 | 0.6022 |
0.7317 |
| AF-Q81X30-F1-model_v4 | 1 | 399 | 8 | 297 | 0.5959 |
0.717 |
| AF-O32882-F1-model_v4 | 1 | 399 | 1 | 297 | 0.591 |
0.6944 |
| AF-A5U7B6-F1-model_v4 | 1 | 399 | 1 | 297 | 0.59 |
0.6934 |
| AF-P9WG19-F1-model_v4 | 1 | 396 | 1 | 297 | 0.5894 |
0.6916 |
| AF-P9WG18-F1-model_v4 | 1 | 396 | 1 | 297 | 0.5888 |
0.6902 |
| AF-Q7TX91-F1-model_v4 | 1 | 396 | 1 | 297 | 0.5877 |
0.6895 |
| AF-O34876-F1-model_v4 | 1 | 400 | 4 | 296 | 0.579 |
0.688 |
| AF-P94412-F1-model_v4 | 1 | 400 | 1 | 480 | 0.5787 |
0.6552 |
| AF-P44872-F1-model_v4 | 1 | 400 | 15 | 309 | 0.5734 |
0.6929 |